myRT

myRT report for GCA_000469645.1_ASM46964v1

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Seq: ASJJ01000040.1 Rhodococcus rhodochrous ATCC 17895 contig_40, whole genome shotgun sequence (29772 bp)
Overview 1 RT 1: 8607-13017 bp Neighborhood of RT #1 [8607, 13043] PRK06557 PBP2_DszB RVT-Retrons RidA MhpC Feature: gene Location: 8607-9314 bp Feature: domain Description: PRK06557 Location: 8652-9252 bp Feature: domain Description: PRK06557 Location: 8652-9252 bp Feature: gene Location: 9356-10297 bp Feature: domain Description: PBP2_DszB Location: 9359-10103 bp Feature: domain Description: PBP2_DszB Location: 9359-1 01 03 bp Feature: gene Location: 10538-11788 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10949-11555 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0949-1 1 555 bp Feature: gene Location: 11802-12188 bp Feature: domain Description: RidA Location: 11838-12177 bp Feature: domain Description: RidA Location: 1 1 838-1 21 77 bp Feature: gene Location: 12231-13043 bp Feature: domain Description: MhpC Location: 12258-13017 bp Feature: domain Description: MhpC Location: 1 2258-1 301 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06557 (L-ribulose-5-phosphate 4-epimerase; Validated), PBP2_DszB (cd13554), RVT-Retrons, RidA (COG0251), MhpC (COG0596)

Seq: ASJJ01000108.1 Rhodococcus rhodochrous ATCC 17895 contig_108, whole genome shotgun sequence (5889 bp)
Overview 1 RT 1: 3-5435 bp Neighborhood of RT #1 [3, 5500] RVT-UG5 Lhr DUF2791 Feature: gene Location: 3-2018 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 465-954 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 465-954 bp Feature: gene Location: 2112-4211 bp Feature: domain Description: Lhr Location: 2127-3750 bp Feature: domain Description: Lhr Location: 2 12 7-3750 bp Feature: gene Location: 4208-5500 bp Feature: domain Description: DUF2791 Location: 4226-5435 bp Feature: domain Description: DUF2 791 Location: 42 2 6-5435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, Lhr (COG1201), DUF2791 (pfam10923)