myRT

myRT report for GCA_000471765.1_ASM47176v1

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Seq: BAIH01000031.1 Oscillospiraceae bacterium VE202-24 DNA, contig: VE202-24_contig00031, whole genome shotgun sequence (24653 bp)
Overview 1 RT 1: 8449-19125 bp Neighborhood of RT #1 [8449, 19160] SCAD_SBCAD fixB YgaK IscR RVT-Retrons Phage_int_SAM_1 INT_C_like_2 NosD_copper_fam NosD_copper_fam SLH SLH Feature: gene Location: 8449-10446 bp Feature: domain Description: SCAD_SBCAD Location: 8473-9583 bp Feature: domain Description: SCAD_SBCAD Location: 8473-9583 bp Feature: domain Description: fixB Location: 9775-10126 bp Feature: domain Description: fixB Location: 9775-1 01 26 bp Feature: domain Description: YgaK Location: 10207-10354 bp Feature: domain Description: YgaK Location: 1 0207-1 0354 bp Feature: gene Location: 10512-10916 bp Feature: domain Description: IscR Location: 10515-10908 bp Feature: domain Description: IscR Location: 1 051 5-1 0908 bp Feature: gene Location: 11226-12620 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11772-12324 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 772-1 2324 bp Feature: gene Location: 12759-13604 bp Feature: domain Description: Phage_int_SAM_1 Location: 12795-13017 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 2795-1 301 7 bp Feature: domain Description: INT_C_like_2 Location: 13092-13584 bp Feature: domain Description: INT_C_like_2 Location: 1 3092-1 3584 bp Feature: gene Location: 14220-19160 bp Feature: domain Description: NosD_copper_fam Location: 17079-17367 bp Feature: domain Description: NosD_copper_fam Location: 1 7079-1 7367 bp Feature: domain Description: NosD_copper_fam Location: 17724-17997 bp Feature: domain Description: NosD_copper_fam Location: 1 7724-1 7997 bp Feature: domain Description: SLH Location: 18675-18795 bp Feature: domain Description: SLH Location: 1 8675-1 8795 bp Feature: domain Description: SLH Location: 18996-19125 bp Feature: domain Description: SLH Location: 1 8996-1 91 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SCAD_SBCAD (cd01158), fixB (PRK03363), YgaK (COG1773), IscR (TIGR02010), RVT-Retrons, Phage_int_SAM_1 (pfam02899), INT_C_like_2 (cd01191), NosD_copper_fam (TIGR04247), SLH (pfam00395)

Seq: BAIH01000005.1 Oscillospiraceae bacterium VE202-24 DNA, contig: VE202-24_contig00005, whole genome shotgun sequence (64187 bp)
Overview 1 RT 1: 53180-56551 bp Neighborhood of RT #1 [53180, 56551] RVT-UG17 SLATT_5 Feature: gene Location: 53180-53407 bp Feature: gene Location: 53579-53977 bp Feature: gene Location: 54133-55167 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 54136-54661 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 54136-54661 bp Feature: gene Location: 55467-56033 bp Feature: domain Description: SLATT_5 Location: 55482-56010 bp Feature: domain Description: SLATT_5 Location: 55482 -56010 bp Feature: gene Location: 56135-56551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)