myRT

myRT report for GCA_000472625.1_ASM47262v1

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Seq: KI421442.1 Caloramator sp. ALD01 genomic scaffold A3M9DRAFT_scaffold_21.22, whole genome shotgun sequence (35782 bp)
Overview 1 RT 1: 14642-21140 bp Neighborhood of RT #1 [14642, 21140] Cas_Cas1 Cas2_I_II_III RVT-UNC AE_Prim_S_like Feature: gene Location: 14642-15571 bp Feature: domain Description: Cas_Cas1 Location: 14654-15470 bp Feature: domain Description: Cas_Cas1 Location: 1 4654-1 5470 bp Feature: gene Location: 15568-15882 bp Feature: domain Description: Cas2_I_II_III Location: 15583-15850 bp Feature: domain Description: Cas2_I_II_III Location: 1 5583-1 5850 bp Feature: gene Location: 15879-18017 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 15906-16464 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 5906-1 6464 bp Feature: domain Description: AE_Prim_S_like Location: 16962-17331 bp Feature: domain Description: AE_Prim_S_like Location: 1 6962-1 7331 bp Feature: gene Location: 18955-19761 bp Feature: gene Location: 20004-21140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas1 (pfam01867), Cas2_I_II_III (cl11442), RVT-CRISPR/RVT-GII/RVT-UNC(RVT-UNC), AE_Prim_S_like (cl01287)

Seq: AXAA01000043.1 Caloramator sp. ALD01 A3M9DRAFT_scaffold_39.40_C, whole genome shotgun sequence (12018 bp)
Overview 1 RT 1: 6886-11426 bp Neighborhood of RT #1 [6886, 11653] PblB RVT-DGRs Feature: gene Location: 6886-7125 bp Feature: gene Location: 7138-10641 bp Feature: domain Description: PblB Location: 7174-8362 bp Feature: domain Description: PblB Location: 7174-8362 bp Feature: gene Location: 10616-11653 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10823-11426 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1082 3-1142 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PblB (COG4926), RVT-DGRs

Seq: AXAA01000010.1 Caloramator sp. ALD01 A3M9DRAFT_scaffold_9.10_C, whole genome shotgun sequence (79821 bp)
Overview 1 RT 1: 71994-77774 bp Neighborhood of RT #1 [71994, 77779] TIGR00366 AtoE RVT-GII GIIM BglG PtsN Feature: gene Location: 71994-72590 bp Feature: domain Description: TIGR00366 Location: 72021-72585 bp Feature: domain Description: TIGR003 66 Location: 72021-72585 bp Feature: gene Location: 72931-73203 bp Feature: domain Description: AtoE Location: 72934-73201 bp Feature: domain Description: AtoE Location: 7293 4-73 201 bp Feature: gene Location: 73681-75090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74026-74641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74026-74641 bp Feature: domain Description: GIIM Note: maturase Location: 74695-74908 bp Feature: domain Description: GIIM Note: maturase Location: 74695-74908 bp Feature: gene Location: 75364-77349 bp Feature: domain Description: BglG Location: 75415-77017 bp Feature: domain Description: BglG Location: 75415-77017 bp Feature: gene Location: 77339-77779 bp Feature: domain Description: PtsN Location: 77348-77774 bp Feature: domain Description: PtsN Location: 773 48-77774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR00366 (TIGR00366 family protein), AtoE (COG2031), RVT-GII, GIIM (pfam08388), BglG (COG3711), PtsN (COG1762)