myRT

myRT report for GCA_000472685.1_ASM47268v1

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Seq: AXAD01000027.1 Bradyrhizobium arachidis strain USDA 3384 A3CKDRAFT_scaffold_26.27_C, whole genome shotgun sequence (96969 bp)
Overview 1 RT 1: 2298-6760 bp Neighborhood of RT #1 [2298, 6837] PRK09039 COG3436 RVT-GII RVT-GII GIIM DDE_Tnp_IS66 Phage_int_SAM_1 INT_RitC_C_like Feature: gene Location: 2298-3131 bp Feature: domain Description: PRK09039 Location: 2304-2607 bp Feature: domain Description: PRK09039 Location: 2304-2607 bp Feature: domain Description: COG3436 Location: 2625-3087 bp Feature: domain Description: COG3436 Location: 2625-3087 bp Feature: gene Location: 3303-3431 bp Feature: gene Location: 3646-4125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3853-4027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3853-4027 bp Feature: gene Location: 4173-4898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4179-4506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 79-4506 bp Feature: domain Description: GIIM Note: maturase Location: 4593-4803 bp Feature: domain Description: GIIM Note: maturase Location: 4593-4803 bp Feature: gene Location: 4951-5523 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4981-5473 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4981 -5473 bp Feature: gene Location: 5836-6837 bp Feature: domain Description: Phage_int_SAM_1 Location: 5881-6124 bp Feature: domain Description: Phage_int_SAM_1 Location: 5881 -61 24 bp Feature: domain Description: INT_RitC_C_like Location: 6217-6760 bp Feature: domain Description: INT_RitC_C_like Location: 621 7-6760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09039 (peptidoglycan -binding protein), COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182)

Seq: AXAD01000032.1 Bradyrhizobium arachidis strain USDA 3384 A3CKDRAFT_scaffold_31.32_C, whole genome shotgun sequence (71674 bp)
Overview 1 RT 1: 44138-47217 bp Neighborhood of RT #1 [44138, 47291] RVT-GII DUF772 secoisolariciresinol-DH_like_SDR_c Feature: gene Location: 44138-44440 bp Feature: gene Location: 44692-44982 bp Feature: gene Location: 45002-45496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45206-45386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452 06-45386 bp Feature: gene Location: 45751-46200 bp Feature: domain Description: DUF772 Location: 45865-46072 bp Feature: domain Description: DUF772 Location: 45865-46072 bp Feature: gene Location: 46464-47291 bp Feature: domain Description: secoisolariciresinol-DH_like_SDR_c Location: 46473-47217 bp Feature: domain Description: secoisolariciresinol-DH_like_SDR_c Location: 46473-472 17 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF772 (pfam05598), secoisolariciresinol-DH_like_SDR_c (cd05326)