myRT

myRT report for GCA_000473065.1_ASM47306v1

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Seq: AXAZ01000001.1 Bradyrhizobium sp. WSM1743 YU9DRAFT_scaffold_0.1_C, whole genome shotgun sequence (454681 bp)
Overview 1 RT 1: 205095-210725 bp Neighborhood of RT #1 [205095, 210784] RVT-UG12 HATPase_c Isochorismatase Feature: gene Location: 205095-205361 bp Feature: gene Location: 205522-205686 bp Feature: gene Location: 205985-207592 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 206324-206777 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 206324-206777 bp Feature: gene Location: 207649-209589 bp Feature: domain Description: HATPase_c Location: 207712-207964 bp Feature: domain Description: HATPase_c Location: 20771 2-207964 bp Feature: gene Location: 210071-210784 bp Feature: domain Description: Isochorismatase Location: 210149-210725 bp Feature: domain Description: Isochorismatase Location: 21 01 49-21 0725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, HATPase_c (smart00387), Isochorismatase (pfam00857)

Seq: AXAZ01000132.1 Bradyrhizobium sp. WSM1743 YU9DRAFT_scaffold_126.127_C, whole genome shotgun sequence (6276 bp)
Overview 1 RT 1: 247-4879 bp Neighborhood of RT #1 [247, 4902] Transposase_mut RVT-GII COG3246 PRK07531 Feature: gene Location: 247-519 bp Feature: domain Description: Transposase_mut Location: 259-403 bp Feature: domain Description: Transposase_mut Location: 2 59-403 bp Feature: gene Location: 587-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842 -1532 bp Feature: gene Location: 2498-3388 bp Feature: domain Description: COG3246 Location: 2504-3377 bp Feature: domain Description: COG32 46 Location: 2 504-3377 bp Feature: gene Location: 3403-4902 bp Feature: domain Description: PRK07531 Location: 3448-4879 bp Feature: domain Description: PRK07531 Location: 3448-4879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII, COG3246 (Uncharacterized conserved protein, DUF849 family ), PRK07531 (carnitine 3-dehydrogenase)

Seq: AXAZ01000150.1 Bradyrhizobium sp. WSM1743 YU9DRAFT_scaffold_144.145_C, whole genome shotgun sequence (2215 bp)
Overview 1 RT 1: 115-2100 bp Neighborhood of RT #1 [115, 2100] RVT-GII GIIM Feature: gene Location: 115-1488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481-1150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481-1150 bp Feature: domain Description: GIIM Note: maturase Location: 1222-1417 bp Feature: domain Description: GIIM Note: maturase Location: 1222-1417 bp Feature: gene Location: 1623-1874 bp Feature: gene Location: 1957-2100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)