myRT

myRT report for GCA_000473165.1_ASM47316v1

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Seq: KI421504.1 Leisingera aquimarina DSM 24565 genomic scaffold Leiaq_neu_scaffold_2516677483.1, whole genome shotgun sequence (4250010 bp)
Overview 1 RT 1: 282722-288207 bp Neighborhood of RT #1 [282722, 288506] integrase_gron Zn_Tnp_IS91 RVT-Retrons Trypsin_2 RimL AcyC TolBN TPR Feature: gene Location: 282722-282952 bp Feature: domain Description: integrase_gron Location: 282728-282908 bp Feature: domain Description: integrase_gron Location: 282728-282908 bp Feature: gene Location: 283067-283375 bp Feature: domain Description: Zn_Tnp_IS91 Location: 283070-283271 bp Feature: domain Description: Zn_Tnp_IS91 Location: 283070-283271 bp Feature: gene Location: 283473-285077 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 283530-284160 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 283530-2841 60 bp Feature: domain Description: Trypsin_2 Location: 284553-284988 bp Feature: domain Description: Trypsin_2 Location: 284553-284988 bp Feature: gene Location: 286012-286662 bp Feature: domain Description: RimL Location: 286039-286555 bp Feature: domain Description: RimL Location: 286039-286555 bp Feature: gene Location: 286734-288506 bp Feature: domain Description: AcyC Location: 286755-287289 bp Feature: domain Description: AcyC Location: 286755-287289 bp Feature: domain Description: TolBN Location: 287316-287715 bp Feature: domain Description: TolBN Location: 28731 6-28771 5 bp Feature: domain Description: TPR Location: 287961-288207 bp Feature: domain Description: TPR Location: 287961 -288207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT integrase_gron (TIGR02249), Zn_Tnp_IS91 (pfam14319), RVT-Retrons, Trypsin_2 (pfam13365), RimL (COG1670), AcyC (COG2114), TolBN (COG5616), TPR (smart00028)