myRT

myRT report for GCA_000473955.1__oprFasNSB1

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Seq: KI440794.1 Coprobacter fastidiosus NSB1 genomic scaffold scaffoldcontig24, whole genome shotgun sequence (67220 bp)
Overview 1 RT 1: 35723-42786 bp Neighborhood of RT #1 [35723, 42803] McrBC RVT-Retrons Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like HTH_17 AlpA HTH_17 HTH_17 Feature: gene Location: 35723-37060 bp Ori: ERM89166.1 Feature: domain Description: McrBC Location: 35939-36887 bp Feature: domain Description: McrBC Location: 35939-36887 bp Feature: gene Location: 38109-39407 bp Feature: gene Location: 39542-40591 bp Ori: ERM89168.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39770-40349 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39770-40349 bp Feature: gene Location: 40698-41879 bp Ori: ERM89169.1 Feature: domain Description: Arm-DNA-bind_5 Location: 40797-41004 bp Feature: domain Description: Arm-DNA-bind_5 Location: 40797-41 004 bp Feature: domain Description: Phage_int_SAM_5 Location: 41061-41328 bp Feature: domain Description: Phage_int_SAM_5 Location: 41 061 -41 328 bp Feature: domain Description: INTN1_C_like Location: 41388-41847 bp Feature: domain Description: INTN1 _C_like Location: 41 388-41 847 bp Feature: gene Location: 41898-42803 bp Ori: ERM89170.1 Feature: domain Description: HTH_17 Location: 42111-42252 bp Feature: domain Description: HTH_1 7 Location: 421 1 1 -42252 bp Feature: domain Description: AlpA Location: 42315-42450 bp Feature: domain Description: AlpA Location: 4231 5-42450 bp Feature: domain Description: HTH_17 Location: 42477-42606 bp Feature: domain Description: HTH_1 7 Location: 42477-42606 bp Feature: domain Description: HTH_17 Location: 42645-42786 bp Feature: domain Description: HTH_1 7 Location: 42645-42786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrBC (pfam10117), RVT-Retrons, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), HTH_17 (pfam12728), AlpA (COG3311)