myRT

myRT report for GCA_000474825.1_Esch_coli_BIDMC_19C_V1_PacBio

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Seq: AXLI01000001.1 (5097434 bp)
Overview 1 RT 1: 2256440-2260440 bp 2 RT 2: 4091690-4095572 bp Neighborhood of RT #1 [2256440, 2260448] DcuC RVT-GII Asparaginase_2 Neighborhood of RT #2 [4091690, 4095577] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 2256440-2257801 bp Feature: domain Description: DcuC Location: 2256443-2257775 bp Feature: domain Description: DcuC Location: 2256443-2257775 bp Feature: gene Location: 2257854-2258225 bp Feature: gene Location: 2258447-2258893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2258753-2258855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2258753-2258855 bp Feature: gene Location: 2258941-2259090 bp Feature: gene Location: 2259417-2260448 bp Feature: domain Description: Asparaginase_2 Location: 2259507-2260440 bp Feature: domain Description: Asparaginase_2 Location: 2259507-2260440 bp Feature: gene Location: 4091690-4092148 bp Feature: domain Description: dut Location: 4091696-4092143 bp Feature: domain Description: dut Location: 4091 696-40921 43 bp Feature: gene Location: 4092255-4092851 bp Feature: domain Description: slmA Location: 4092261-4092837 bp Feature: domain Description: slmA Location: 4092261 -4092837 bp Feature: gene Location: 4092897-4093856 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4093032-4093581 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4093032-4093581 bp Feature: gene Location: 4094154-4094810 bp Feature: domain Description: pyrE Location: 4094172-4094805 bp Feature: domain Description: pyrE Location: 40941 72-4094805 bp Feature: gene Location: 4094861-4095577 bp Feature: domain Description: rph Location: 4094864-4095572 bp Feature: domain Description: rph Location: 4094864-4095572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112), dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)