myRT

myRT report for GCA_000474865.1_Kleb_pneu_BIDMC_18C_V1_PacBio

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Seq: AXLE01000004.1 (206883 bp)
Overview 1 RT 1: 95547-98663 bp Neighborhood of RT #1 [95547, 98663] PRK10276 RVT-GII Feature: gene Location: 95547-95972 bp Feature: domain Description: PRK10276 Location: 95550-95958 bp Feature: domain Description: PRK1 0276 Location: 95550-95958 bp Feature: gene Location: 96166-96378 bp Feature: gene Location: 96453-97862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96780-97470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96780-97470 bp Feature: gene Location: 98096-98326 bp Feature: gene Location: 98385-98663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AXLE01000001.1 (5403737 bp)
Overview 1 RT 1: 581564-587962 bp 2 RT 2: 1027209-1030458 bp 3 RT 3: 1415194-1419302 bp 4 RT 4: 1600900-1606777 bp 5 RT 5: 2842908-2847789 bp Neighborhood of RT #1 [581564, 588063] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1027209, 1030850] YbjK int RVT-GII Neighborhood of RT #3 [1415194, 1419304] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1600900, 1606779] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2842908, 2847794] YccC PRK10016 RVT-GII dacD Feature: gene Location: 581564-584551 bp Feature: gene Location: 584555-585286 bp Feature: domain Description: Laminin_G_3 Location: 584876-585230 bp Feature: domain Description: Laminin_G_3 Location: 584876-5852 30 bp Feature: gene Location: 585942-587429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586347-587037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586347-587037 bp Feature: gene Location: 587519-587698 bp Feature: gene Location: 587746-588063 bp Feature: domain Description: PRK10276 Location: 587752-587866 bp Feature: domain Description: PRK102 76 Location: 587752 -587866 bp Feature: domain Description: PRK10276 Location: 587893-587962 bp Feature: domain Description: PRK102 76 Location: 587893-587962 bp Feature: gene Location: 1027209-1027772 bp Feature: domain Description: YbjK Location: 1027215-1027752 bp Feature: domain Description: YbjK Location: 102 72 15-102 7752 bp Feature: gene Location: 1027895-1028947 bp Feature: domain Description: int Location: 1027898-1028897 bp Feature: domain Description: int Location: 102 7898-102 8897 bp Feature: gene Location: 1029363-1030850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029768-1030458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 9768-1030458 bp Feature: gene Location: 1415194-1415436 bp Feature: domain Description: DinI Location: 1415245-1415425 bp Feature: domain Description: DinI Location: 14152 45-141542 5 bp Feature: gene Location: 1415451-1415597 bp Feature: gene Location: 1416051-1417538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1416456-1417146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1416456-1417146 bp Feature: gene Location: 1417617-1418036 bp Feature: domain Description: PRK10276 Location: 1417620-1418031 bp Feature: domain Description: PRK102 76 Location: 141762 0-1418031 bp Feature: gene Location: 1418039-1419304 bp Feature: domain Description: umuC Location: 1418042-1419302 bp Feature: domain Description: umuC Location: 1418042 -1419302 bp Feature: gene Location: 1600900-1601616 bp Feature: domain Description: Rve Location: 1600915-1601560 bp Feature: domain Description: Rve Location: 1600915-1601560 bp Feature: gene Location: 1601622-1602131 bp Feature: domain Description: PinE Location: 1601670-1602123 bp Feature: domain Description: PinE Location: 1601670-1602 12 3 bp Feature: gene Location: 1603526-1605013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1603931-1604621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1603931-160462 1 bp Feature: gene Location: 1605093-1605512 bp Feature: domain Description: PRK10276 Location: 1605096-1605507 bp Feature: domain Description: PRK102 76 Location: 1605096-1605507 bp Feature: gene Location: 1605514-1606779 bp Feature: domain Description: umuC Location: 1605517-1606777 bp Feature: domain Description: umuC Location: 1605517-1606777 bp Feature: gene Location: 2842908-2843966 bp Feature: domain Description: YccC Location: 2842914-2843952 bp Feature: domain Description: YccC Location: 2 842 914-2 843952 bp Feature: gene Location: 2844065-2844538 bp Feature: domain Description: PRK10016 Location: 2844068-2844527 bp Feature: domain Description: PRK10016 Location: 2 844068-2 84452 7 bp Feature: gene Location: 2844620-2846104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2845022-2845712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 84502 2 -2 845712 bp Feature: gene Location: 2846113-2846280 bp Feature: gene Location: 2846625-2847794 bp Feature: domain Description: dacD Location: 2846634-2847789 bp Feature: domain Description: dacD Location: 2 846634-2 847789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AXLE01000003.1 (54840 bp)
Overview 1 RT 1: 20462-24898 bp Neighborhood of RT #1 [20462, 24906] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 20462-20839 bp Feature: domain Description: DDE_Tnp_IS1 Location: 20465-20837 bp Feature: domain Description: DDE_Tnp_IS1 Location: 20465-2083 7 bp Feature: gene Location: 20884-21159 bp Feature: domain Description: InsA Location: 20887-21151 bp Feature: domain Description: InsA Location: 20887-21151 bp Feature: gene Location: 21311-22798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21716-22406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21716-22406 bp Feature: gene Location: 22952-23635 bp Feature: domain Description: PRK10276 Location: 23255-23618 bp Feature: domain Description: PRK10276 Location: 23 255-23 618 bp Feature: gene Location: 23635-24906 bp Feature: domain Description: umuC Location: 23638-24898 bp Feature: domain Description: umuC Location: 23 63 8-24898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT