myRT

myRT report for GCA_000475015.1_wMelPop

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Seq: KI440883.1 (547521 bp)
Overview 1 RT 1: 222087-226263 bp Neighborhood of RT #1 [222087, 226268] T_den_put_tspse RVT_N RVT-GII PDDEXK_2 Dimer_Tnp_Tn5 Feature: gene Location: 222087-222497 bp Feature: domain Description: T_den_put_tspse Location: 222192-222477 bp Feature: domain Description: T_den_put_tspse Location: 2221 92-222477 bp Feature: gene Location: 222776-222940 bp Feature: gene Location: 224302-225018 bp Feature: domain Description: RVT_N Location: 224353-224599 bp Feature: domain Description: RVT_N Location: 224353-224599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224641-224953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224641 -224953 bp Feature: gene Location: 225499-225906 bp Feature: domain Description: PDDEXK_2 Location: 225577-225892 bp Feature: domain Description: PDDEXK_2 Location: 225577-225892 bp Feature: gene Location: 226014-226268 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 226107-226263 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2261 07-226263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, PDDEXK_2 (pfam12784), Dimer_Tnp_Tn5 (pfam02281)

Seq: KI440878.1 (718 bp)
Overview 1 RT 1: 110-347 bp Neighborhood of RT #1 [110, 715] RVT-GII Feature: gene Location: 110-715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KI440888.1 (42289 bp)
Overview 1 RT 1: 12852-16228 bp Neighborhood of RT #1 [12852, 16228] RVT-GII pcrA Feature: gene Location: 12852-12980 bp Feature: gene Location: 13013-13234 bp Feature: gene Location: 13389-13532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13392-13527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 3 92-13 527 bp Feature: gene Location: 13756-15672 bp Feature: domain Description: pcrA Location: 13768-15652 bp Feature: domain Description: pcrA Location: 13 768-15652 bp Feature: gene Location: 15800-16228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, pcrA (TIGR01073)

Seq: KI440895.1 (2302 bp)
Overview 1 RT 1: 3-1908 bp Neighborhood of RT #1 [3, 2180] RVT_N RVT-GII GIIM Feature: gene Location: 3-203 bp Feature: gene Location: 452-595 bp Feature: gene Location: 633-2180 bp Feature: domain Description: RVT_N Location: 684-921 bp Feature: domain Description: RVT_N Location: 684 -921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 972-1623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 972-1623 bp Feature: domain Description: GIIM Note: maturase Location: 1674-1908 bp Feature: domain Description: GIIM Note: maturase Location: 1674 -1908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: KI440873.1 (1145 bp)
Overview 1 RT 1: 1-1078 bp Neighborhood of RT #1 [1, 1078] RVT-GII group_II_RT_mat Feature: gene Location: 1-381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-376 bp Feature: gene Location: 465-704 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 552-693 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5 5 2-693 bp Feature: gene Location: 875-1078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)