myRT

myRT report for GCA_000476315.1_UTAD54_1

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Seq: AUZV01000010.1 (149176 bp)
Overview 1 RT 1: 65054-67705 bp Neighborhood of RT #1 [65054, 67705] PRK15287 FimA RVT-UG4 Feature: gene Location: 65054-65548 bp Feature: domain Description: PRK15287 Location: 65120-65546 bp Feature: domain Description: PRK1 5287 Location: 651 20-65546 bp Feature: gene Location: 65562-66107 bp Feature: domain Description: FimA Location: 65607-66105 bp Feature: domain Description: FimA Location: 65607-661 05 bp Feature: gene Location: 66162-66404 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 66165-66366 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 661 65-66366 bp Feature: gene Location: 66593-67414 bp Feature: gene Location: 67535-67705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4

Seq: AUZV01000113.1 (1553 bp)
Overview 1 RT 1: 2-1548 bp Neighborhood of RT #1 [2, 1550] RVT-UG4 FimD Feature: gene Location: 2-931 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 392-830 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 392 -830 bp Feature: gene Location: 1023-1550 bp Feature: domain Description: FimD Location: 1026-1548 bp Feature: domain Description: FimD Location: 102 6-1548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimD (COG3188)

Seq: AUZV01000045.1 (49068 bp)
Overview 1 RT 1: 14945-18436 bp Neighborhood of RT #1 [14945, 18436] PRK15287 FimA RVT-UG4 Feature: gene Location: 14945-15430 bp Feature: domain Description: PRK15287 Location: 14963-15428 bp Feature: domain Description: PRK15287 Location: 14963 -15428 bp Feature: gene Location: 15446-15979 bp Feature: domain Description: FimA Location: 15491-15977 bp Feature: domain Description: FimA Location: 15491-15977 bp Feature: gene Location: 15933-16919 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 16407-16851 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 16407-16851 bp Feature: gene Location: 17051-18031 bp Feature: gene Location: 18077-18436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4

Seq: AUZV01000019.1 (101567 bp)
Overview 1 RT 1: 42266-46047 bp Neighborhood of RT #1 [42266, 46061] STAS_anti-anti-sigma_factors RVT-GII PRK09290 PucG Feature: gene Location: 42266-42598 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 42278-42563 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 4 2278-4 2563 bp Feature: gene Location: 42674-42820 bp Feature: gene Location: 43138-43479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43213-43378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 3213-4 3378 bp Feature: gene Location: 43528-44814 bp Feature: domain Description: PRK09290 Location: 43564-44761 bp Feature: domain Description: PRK09290 Location: 4 3564 -4 4 761 bp Feature: gene Location: 44814-46061 bp Feature: domain Description: PucG Location: 44859-46047 bp Feature: domain Description: PucG Location: 4 4 859-4 604 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STAS_anti-anti-sigma_factors (cd07043), RVT-GII, PRK09290 (allantoate amidohydrolase; Reviewed), PucG (COG0075)