myRT

myRT report for GCA_000481145.1_Pseu_aeru_BWH028_V1

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Seq: KI518967.1 (911363 bp)
Overview 1 RT 1: 716584-721698 bp 2 RT 2: 749702-760176 bp 3 RT 3: 776434-785265 bp Neighborhood of RT #1 [716584, 721698] FACL_FadD13-like RVT-UG17 SLATT_5 Neighborhood of RT #2 [749702, 760178] RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #3 [776434, 785294] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 716584-717906 bp Feature: domain Description: FACL_FadD13-like Location: 716590-717856 bp Feature: domain Description: FACL_FadD1 3-like Location: 71 6590-71 7856 bp Feature: gene Location: 718446-718634 bp Feature: gene Location: 718740-720104 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 718968-719571 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 71 8968-71 9571 bp Feature: gene Location: 720104-720643 bp Feature: domain Description: SLATT_5 Location: 720110-720608 bp Feature: domain Description: SLATT_5 Location: 7201 1 0-720608 bp Feature: gene Location: 721300-721698 bp Feature: gene Location: 749702-750109 bp Feature: gene Location: 750121-750585 bp Feature: gene Location: 751724-753409 bp Feature: domain Description: RVT_N Location: 751781-752021 bp Feature: domain Description: RVT_N Location: 751 781 -752021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752069-752705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752069-752705 bp Feature: domain Description: GIIM Note: maturase Location: 752759-752990 bp Feature: domain Description: GIIM Note: maturase Location: 752759-752990 bp Feature: domain Description: HNH Note: nucleases Location: 753242-753380 bp Feature: domain Description: HNH Note: nucleases Location: 753242-753380 bp Feature: gene Location: 754490-758218 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 754589-755246 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 754589-755246 bp Feature: domain Description: PRK09776 Location: 755459-755930 bp Feature: domain Description: PRK09776 Location: 755459-755930 bp Feature: domain Description: PAS Location: 755978-756512 bp Feature: domain Description: PAS Location: 755978-75651 2 bp Feature: domain Description: PRK10060 Location: 756521-758168 bp Feature: domain Description: PRK1 0060 Location: 756521 -7581 68 bp Feature: gene Location: 758325-760178 bp Feature: domain Description: PRK05658 Location: 758337-760176 bp Feature: domain Description: PRK05658 Location: 758337-7601 76 bp Feature: gene Location: 776434-777648 bp Feature: domain Description: PRK10770 Location: 776446-777640 bp Feature: domain Description: PRK1 0770 Location: 776446-777640 bp Feature: gene Location: 777707-780490 bp Feature: domain Description: LptD Location: 777902-780476 bp Feature: domain Description: LptD Location: 777902-780476 bp Feature: gene Location: 780623-782335 bp Feature: domain Description: RVT_N Location: 780680-780923 bp Feature: domain Description: RVT_N Location: 780680-780923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780968-781601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780968-781 601 bp Feature: domain Description: YkfC Location: 781814-781964 bp Feature: domain Description: YkfC Location: 781 81 4-781 964 bp Feature: domain Description: HNH Note: nucleases Location: 782141-782279 bp Feature: domain Description: HNH Note: nucleases Location: 7821 41 -782279 bp Feature: gene Location: 783607-784623 bp Feature: domain Description: COG3178 Location: 783610-784609 bp Feature: domain Description: COG31 78 Location: 78361 0-784609 bp Feature: gene Location: 784620-785294 bp Feature: domain Description: NTP_transferase_like_1 Location: 784626-785265 bp Feature: domain Description: NTP_transferase_like_1 Location: 784626-785265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FACL_FadD13-like (cd17631), RVT-UG17, SLATT_5 (pfam18160), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091)
PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), YkfC (COG3344), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: KI518966.1 (1039472 bp)
Overview 1 RT 1: 980596-986084 bp Neighborhood of RT #1 [980596, 986095] PRK13360 COG3450 RVT_N RVT-GII YkfC HNHc rpmG RpmB Feature: gene Location: 980596-981924 bp Feature: domain Description: PRK13360 Location: 980602-981916 bp Feature: domain Description: PRK13360 Location: 980602 -981916 bp Feature: gene Location: 981991-982353 bp Feature: domain Description: COG3450 Location: 981994-982339 bp Feature: domain Description: COG3450 Location: 981994-982 339 bp Feature: gene Location: 982565-984262 bp Feature: domain Description: RVT_N Location: 982622-982865 bp Feature: domain Description: RVT_N Location: 982 62 2 -982 865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982910-983546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982 910-983546 bp Feature: domain Description: YkfC Location: 983768-983903 bp Feature: domain Description: YkfC Location: 983768-983903 bp Feature: domain Description: HNHc Note: nucleases Location: 984050-984215 bp Feature: domain Description: HNHc Note: nucleases Location: 984050-9842 15 bp Feature: gene Location: 985692-985847 bp Feature: domain Description: rpmG Location: 985695-985839 bp Feature: domain Description: rpmG Location: 985695-985839 bp Feature: gene Location: 985859-986095 bp Feature: domain Description: RpmB Location: 985862-986084 bp Feature: domain Description: RpmB Location: 985862 -986084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13360 (omega amino acid--pyruvate transaminase; Provisional), COG3450 (Predicted enzyme of the cupin superfamily ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), rpmG (PRK00595), RpmB (COG0227)