myRT

myRT report for GCA_000481365.1_Pseu_aeru_BWH017_V1

Download annotations/find similar RTs

Seq: KI519065.1 (725194 bp)
Overview 1 RT 1: 72078-82375 bp Neighborhood of RT #1 [72078, 82386] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 72078-73931 bp Feature: domain Description: PRK05658 Location: 72090-73929 bp Feature: domain Description: PRK05658 Location: 72090-73929 bp Feature: gene Location: 74038-77775 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 74146-74803 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 741 46-74803 bp Feature: domain Description: PRK09776 Location: 75016-75487 bp Feature: domain Description: PRK09776 Location: 7501 6-75487 bp Feature: domain Description: PAS Location: 75544-76069 bp Feature: domain Description: PAS Location: 75544-76069 bp Feature: domain Description: PRK10060 Location: 76078-77725 bp Feature: domain Description: PRK1 0060 Location: 76078-77725 bp Feature: gene Location: 78856-80541 bp Feature: domain Description: RVT_N Location: 78913-79153 bp Feature: domain Description: RVT_N Location: 7891 3-791 53 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79201-79837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79201 -79837 bp Feature: domain Description: GIIM Note: maturase Location: 79891-80122 bp Feature: domain Description: GIIM Note: maturase Location: 79891 -801 22 bp Feature: domain Description: HNH Note: nucleases Location: 80374-80512 bp Feature: domain Description: HNH Note: nucleases Location: 80374-8051 2 bp Feature: gene Location: 80869-81006 bp Feature: gene Location: 81265-82386 bp Feature: domain Description: COG3177 Location: 81283-82375 bp Feature: domain Description: COG31 77 Location: 81 283-82375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )

Seq: KI519063.1 (3670945 bp)
Overview 1 RT 1: 903614-910863 bp 2 RT 2: 3029472-3033245 bp Neighborhood of RT #1 [903614, 910925] HxlR PRK06333 RVT-UG2 YHI9 STN TonB-siderophor Neighborhood of RT #2 [3029472, 3033271] PHA02517 IS5 RVT-GII GIIM IS5 Feature: gene Location: 903614-904120 bp Feature: domain Description: HxlR Location: 903638-903956 bp Feature: domain Description: HxlR Location: 903638-903956 bp Feature: gene Location: 904229-905497 bp Feature: domain Description: PRK06333 Location: 904235-905492 bp Feature: domain Description: PRK06333 Location: 9042 35-905492 bp Feature: gene Location: 905996-907342 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 906245-907031 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 9062 45-907031 bp Feature: gene Location: 907526-908362 bp Feature: domain Description: YHI9 Location: 907538-908354 bp Feature: domain Description: YHI9 Location: 907538-908354 bp Feature: gene Location: 908523-910925 bp Feature: domain Description: STN Location: 908643-908796 bp Feature: domain Description: STN Location: 908643-908796 bp Feature: domain Description: TonB-siderophor Location: 908904-910863 bp Feature: domain Description: TonB-siderophor Location: 908904-910863 bp Feature: gene Location: 3029472-3030317 bp Feature: domain Description: PHA02517 Location: 3029508-3030306 bp Feature: domain Description: PHA02 517 Location: 302 9508-3030306 bp Feature: gene Location: 3030388-3030642 bp Feature: domain Description: IS5 Location: 3030397-3030631 bp Feature: domain Description: IS5 Location: 3030397-3030631 bp Feature: gene Location: 3031649-3032740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3031652-3032234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3031652 -3032 2 34 bp Feature: domain Description: GIIM Note: maturase Location: 3032285-3032519 bp Feature: domain Description: GIIM Note: maturase Location: 3032 2 85-3032 519 bp Feature: gene Location: 3032849-3033271 bp Feature: domain Description: IS5 Location: 3032855-3033245 bp Feature: domain Description: IS5 Location: 3032 855-30332 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2, YHI9 (COG0384), STN (smart00965), TonB-siderophor (TIGR01783), PHA02517 (putative transposase OrfB; Reviewed), IS5 (COG3039), RVT-GII, GIIM (pfam08388)