myRT

myRT report for GCA_000481645.1_Pseu_aeru_BWH003_V1

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Seq: KI519165.1 (2023680 bp)
Overview 1 RT 1: 852164-859413 bp Neighborhood of RT #1 [852164, 859475] HxlR PRK06333 RVT-UG2 YHI9 STN TonB-siderophor Feature: gene Location: 852164-852670 bp Feature: domain Description: HxlR Location: 852188-852506 bp Feature: domain Description: HxlR Location: 8521 88-852506 bp Feature: gene Location: 852779-854047 bp Feature: domain Description: PRK06333 Location: 852785-854042 bp Feature: domain Description: PRK06333 Location: 852785-854042 bp Feature: gene Location: 854546-855892 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 854795-855581 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 854795-855581 bp Feature: gene Location: 856076-856912 bp Feature: domain Description: YHI9 Location: 856088-856904 bp Feature: domain Description: YHI9 Location: 856088-856904 bp Feature: gene Location: 857073-859475 bp Feature: domain Description: STN Location: 857193-857346 bp Feature: domain Description: STN Location: 8571 93-857346 bp Feature: domain Description: TonB-siderophor Location: 857454-859413 bp Feature: domain Description: TonB-siderophor Location: 857454-85941 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2, YHI9 (COG0384), STN (smart00965), TonB-siderophor (TIGR01783)

Seq: KI519166.1 (1604168 bp)
Overview 1 RT 1: 953735-957508 bp Neighborhood of RT #1 [953735, 957534] PHA02517 IS5 RVT-GII GIIM IS5 Feature: gene Location: 953735-954580 bp Feature: domain Description: PHA02517 Location: 953771-954569 bp Feature: domain Description: PHA02 517 Location: 953771-954569 bp Feature: gene Location: 954651-954905 bp Feature: domain Description: IS5 Location: 954660-954894 bp Feature: domain Description: IS5 Location: 954660-954894 bp Feature: gene Location: 955912-957003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955915-956497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955915-956497 bp Feature: domain Description: GIIM Note: maturase Location: 956548-956782 bp Feature: domain Description: GIIM Note: maturase Location: 956548-956782 bp Feature: gene Location: 957112-957534 bp Feature: domain Description: IS5 Location: 957118-957508 bp Feature: domain Description: IS5 Location: 957118-957508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), IS5 (COG3039), RVT-GII, GIIM (pfam08388)

Seq: KI519167.1 (666093 bp)
Overview 1 RT 1: 578867-589173 bp Neighborhood of RT #1 [578867, 589175] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 578867-579988 bp Feature: domain Description: COG3177 Location: 578885-579977 bp Feature: domain Description: COG3 177 Location: 578885-579977 bp Feature: gene Location: 580247-580384 bp Feature: gene Location: 580712-582397 bp Feature: domain Description: RVT_N Location: 580769-581009 bp Feature: domain Description: RVT_N Location: 580769-581009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581057-581693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581057-581693 bp Feature: domain Description: GIIM Note: maturase Location: 581747-581978 bp Feature: domain Description: GIIM Note: maturase Location: 581747-581978 bp Feature: domain Description: HNH Note: nucleases Location: 582230-582368 bp Feature: domain Description: HNH Note: nucleases Location: 58223 0-5823 68 bp Feature: gene Location: 583478-587215 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 583586-584243 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 583 586-584243 bp Feature: domain Description: PRK09776 Location: 584456-584927 bp Feature: domain Description: PRK09776 Location: 584456-584927 bp Feature: domain Description: PAS Location: 584984-585509 bp Feature: domain Description: PAS Location: 584984-585509 bp Feature: domain Description: PRK10060 Location: 585518-587165 bp Feature: domain Description: PRK10060 Location: 585518-587165 bp Feature: gene Location: 587322-589175 bp Feature: domain Description: PRK05658 Location: 587334-589173 bp Feature: domain Description: PRK05658 Location: 5873 3 4-589173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)