myRT

myRT report for GCA_000482825.1_ASM48282v1

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Seq: AXWU01000006.1 (44402 bp)
Overview 1 RT 1: 13213-17880 bp Neighborhood of RT #1 [13213, 18797] DUF2283 PRK00024 group_II_RT_mat RVT-UG13 N6_N4_Mtase Feature: gene Location: 13213-13425 bp Feature: domain Description: DUF2283 Location: 13234-13375 bp Feature: domain Description: DUF2283 Location: 1 3234-1 3375 bp Feature: gene Location: 13788-14459 bp Feature: domain Description: PRK00024 Location: 13797-14442 bp Feature: domain Description: PRK00024 Location: 1 3797-1 4442 bp Feature: gene Location: 14599-16356 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 14695-14884 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 4695-1 4884 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 14980-15460 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 1 4980-1 5460 bp Feature: gene Location: 16556-16879 bp Feature: gene Location: 17022-18797 bp Feature: domain Description: N6_N4_Mtase Location: 17031-17880 bp Feature: domain Description: N6_N4_Mtase Location: 1 7031 -1 7880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2283 (pfam10049), PRK00024 (DNA repair protein RadC), group_II_RT_mat (TIGR04416), RVT-UG13, N6_N4_Mtase (pfam01555)

Seq: AXWU01000012.1 (439044 bp)
Overview 1 RT 1: 133175-140172 bp Neighborhood of RT #1 [133175, 140558] Cas2_I_II_III Cas1_I-II-III RVT-GII GIIM TPR COG4951 cas_TM1811_Csm1 Feature: gene Location: 133175-133450 bp Feature: domain Description: Cas2_I_II_III Location: 133184-133409 bp Feature: domain Description: Cas2 _I_II_III Location: 133184-133409 bp Feature: gene Location: 133452-134447 bp Feature: domain Description: Cas1_I-II-III Location: 133461-134409 bp Feature: domain Description: Cas1_I-II-III Location: 133461-134409 bp Feature: gene Location: 134450-137275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134669-135254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134669-1352 54 bp Feature: domain Description: GIIM Note: maturase Location: 135305-135425 bp Feature: domain Description: GIIM Note: maturase Location: 135305-13542 5 bp Feature: domain Description: TPR Location: 135593-135872 bp Feature: domain Description: TPR Location: 135593-135872 bp Feature: domain Description: COG4951 Location: 135956-136703 bp Feature: domain Description: COG4951 Location: 135956-136703 bp Feature: gene Location: 137330-137518 bp Feature: gene Location: 138249-140558 bp Feature: domain Description: cas_TM1811_Csm1 Location: 138273-140172 bp Feature: domain Description: cas_TM1811_Csm1 Location: 1382 73-140172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-GII, GIIM (pfam08388), TPR (smart00028), COG4951 (Uncharacterized protein ), cas_TM1811_Csm1 (TIGR02578)