myRT

myRT report for GCA_000487975.1_Acin_lwof_CIP64_10_V2

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Seq: KI530561.1 (2035003 bp)
Overview 1 RT 1: 1862697-1871533 bp Neighborhood of RT #1 [1862697, 1871541] PRK07209 RVT-UG5 RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like HsdM Feature: gene Location: 1862697-1862825 bp Feature: gene Location: 1862967-1864250 bp Feature: domain Description: PRK07209 Location: 1862979-1864248 bp Feature: domain Description: PRK07209 Location: 1 862979-1 864248 bp Feature: gene Location: 1864375-1867617 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1864906-1865398 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 864906-1 865398 bp Feature: gene Location: 1867633-1870059 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 1868002-1868497 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 1 868002-1 868497 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 1868797-1869364 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 1 868797-1 869364 bp Feature: gene Location: 1870066-1871541 bp Feature: domain Description: HsdM Location: 1870072-1871533 bp Feature: domain Description: HsdM Location: 1 870072-1 871 533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07209 (ribonucleotide-diphosphate reductase subunit beta; Validated), RVT-UG5, RMtype1_S_SonII-TRD2-CR2_like (cd17246), HsdM (COG0286)

Seq: KI530566.1 (189466 bp)
Overview 1 RT 1: 118868-122488 bp Neighborhood of RT #1 [118868, 122508] PHA02517 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 118868-119380 bp Feature: domain Description: PHA02517 Location: 118895-119360 bp Feature: domain Description: PHA02 517 Location: 118895-119360 bp Feature: gene Location: 119787-120284 bp Feature: domain Description: PHA02517 Location: 119814-120264 bp Feature: domain Description: PHA02 517 Location: 119814-12 02 64 bp Feature: gene Location: 120337-121578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120535-121192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 0535-12 1192 bp Feature: domain Description: GIIM Note: maturase Location: 121270-121501 bp Feature: domain Description: GIIM Note: maturase Location: 12 12 70-12 1501 bp Feature: gene Location: 121585-121749 bp Feature: gene Location: 122071-122508 bp Feature: domain Description: PHA02517 Location: 122137-122488 bp Feature: domain Description: PHA02 517 Location: 12 2 137-12 2 488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: KI530569.1 (14188 bp)
Overview 1 RT 1: 160-4549 bp Neighborhood of RT #1 [160, 4560] InsE PHA02517 RVT-GII GIIM PHA02517 HMA HMA CzcD Feature: gene Location: 160-438 bp Feature: domain Description: InsE Location: 172-430 bp Feature: domain Description: InsE Location: 172-43 0 bp Feature: gene Location: 645-857 bp Feature: domain Description: PHA02517 Location: 666-837 bp Feature: domain Description: PHA02517 Location: 666-83 7 bp Feature: gene Location: 1350-2591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548-2205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548-2205 bp Feature: domain Description: GIIM Note: maturase Location: 2283-2514 bp Feature: domain Description: GIIM Note: maturase Location: 2283 -2514 bp Feature: gene Location: 2644-3141 bp Feature: domain Description: PHA02517 Location: 2671-3121 bp Feature: domain Description: PHA02517 Location: 2671-3 121 bp Feature: gene Location: 3268-4560 bp Feature: domain Description: HMA Location: 3559-3730 bp Feature: domain Description: HMA Location: 3 559-3 73 0 bp Feature: domain Description: HMA Location: 3787-3964 bp Feature: domain Description: HMA Location: 3 787-3 964 bp Feature: domain Description: CzcD Location: 4021-4549 bp Feature: domain Description: CzcD Location: 4021-4549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HMA (pfam00403), CzcD (COG1230)