myRT

myRT report for GCA_000488075.1_Esch_coli_UMEA_3426-1_V1

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Seq: KI530635.1 (1303639 bp)
Overview 1 RT 1: 651509-655220 bp Neighborhood of RT #1 [651509, 655387] InsE PHA02517 RVT-GII GIIM COG2085 Feature: gene Location: 651509-651883 bp Feature: domain Description: InsE Location: 651620-651869 bp Feature: domain Description: InsE Location: 651 620-651 869 bp Feature: gene Location: 651939-652364 bp Feature: domain Description: PHA02517 Location: 651963-652299 bp Feature: domain Description: PHA0251 7 Location: 651 963-652299 bp Feature: gene Location: 652956-654479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 653229-653961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 653229-653961 bp Feature: domain Description: GIIM Note: maturase Location: 654036-654234 bp Feature: domain Description: GIIM Note: maturase Location: 654036-654234 bp Feature: gene Location: 654674-654808 bp Feature: gene Location: 654974-655387 bp Feature: domain Description: COG2085 Location: 655073-655220 bp Feature: domain Description: COG2085 Location: 655073-655220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: KI530631.1 (488143 bp)
Overview 1 RT 1: 384982-388350 bp Neighborhood of RT #1 [384982, 388415] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 384982-385134 bp Feature: gene Location: 385258-385704 bp Feature: domain Description: PHA02517 Location: 385261-385702 bp Feature: domain Description: PHA02 517 Location: 3852 61-385702 bp Feature: gene Location: 385821-387344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386094-386826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386094-38682 6 bp Feature: domain Description: GIIM Note: maturase Location: 386901-387099 bp Feature: domain Description: GIIM Note: maturase Location: 386901-387099 bp Feature: gene Location: 387298-387723 bp Feature: gene Location: 387936-388415 bp Feature: domain Description: PHA02517 Location: 387996-388350 bp Feature: domain Description: PHA02 517 Location: 387996-388350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: KI530636.1 (1672558 bp)
Overview 1 RT 1: 1292290-1296228 bp Neighborhood of RT #1 [1292290, 1296228] HTH_29 HTH_33 DDE_3 RVT-AbiP2 PRK09183 Feature: gene Location: 1292290-1292580 bp Feature: gene Location: 1292590-1293651 bp Feature: domain Description: HTH_29 Location: 1292710-1292881 bp Feature: domain Description: HTH_29 Location: 1292710-1292881 bp Feature: domain Description: HTH_33 Location: 1292914-1293076 bp Feature: domain Description: HTH_3 3 Location: 1292914-1293 076 bp Feature: domain Description: DDE_3 Location: 1293118-1293547 bp Feature: domain Description: DDE_3 Location: 1293 118-1293 547 bp Feature: gene Location: 1293753-1295123 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1294014-1294470 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1294014-1294470 bp Feature: gene Location: 1295162-1295941 bp Feature: domain Description: PRK09183 Location: 1295168-1295939 bp Feature: domain Description: PRK09183 Location: 1295168-129593 9 bp Feature: gene Location: 1296034-1296228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional)