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myRT report for GCA_000490155.1_S114
Download annotations/find similar RTs
Seq:
AWJL01000016.1 (31767 bp)
Overview
1
RT 1: 2-7332 bp
2
RT 2: 10657-18667 bp
Neighborhood of RT #1 [2, 7332]
HsdR
RVT-UG1
Neighborhood of RT #2 [10657, 18667]
DUF3800
RVT-Retrons
AAA_21
Feature: gene
Location: 2-2989 bp
Feature: domain
Description: HsdR
Location: 77-2906 bp
Feature: domain
Description: HsdR
Location: 77-2906 bp
Feature: gene
Location: 3059-6928 bp
Feature: RT
Description: RVT-UG1
Note: UG1 RT
Location: 3746-4274 bp
Feature: RT
Description: RVT-UG1
Note: UG1 RT
Location: 3746-4274 bp
Feature: gene
Location: 7022-7180 bp
Feature: gene
Location: 7183-7332 bp
Feature: gene
Location: 10657-11724 bp
Feature: domain
Description: DUF3800
Location: 10660-11524 bp
Feature: domain
Description: DUF3800
Location: 1 0660-1 1 524 bp
Feature: gene
Location: 11781-13490 bp
Feature: gene
Location: 13546-14688 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 13774-14314 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 1 3774-1 431 4 bp
Feature: gene
Location: 14782-16890 bp
Feature: domain
Description: AAA_21
Location: 14857-15805 bp
Feature: domain
Description: AAA_21
Location: 1 4857-1 5805 bp
Feature: gene
Location: 17003-18667 bp
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Associated domains:
myRT
HsdR (COG4096)
,
RVT-UG1
,
DUF3800 (pfam12686)
,
RVT-Retrons
,
AAA_21 (pfam13304)