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myRT report for GCA_000490235.1_S110
Download annotations/find similar RTs
Seq:
AWJP01000016.1 (31766 bp)
Overview
1
RT 1: 2-7179 bp
2
RT 2: 10656-18666 bp
Neighborhood of RT #1 [2, 7179]
HsdR
RVT-UG1
Neighborhood of RT #2 [10656, 18666]
DUF3800
RVT-Retrons
AAA_21
Feature: gene
Location: 2-2989 bp
Feature: domain
Description: HsdR
Location: 77-2906 bp
Feature: domain
Description: HsdR
Location: 77-2906 bp
Feature: gene
Location: 3059-4129 bp
Feature: RT
Description: RVT-UG1
Note: UG1 RT
Location: 3746-4124 bp
Feature: RT
Description: RVT-UG1
Note: UG1 RT
Location: 3746-41 24 bp
Feature: gene
Location: 4198-6927 bp
Feature: gene
Location: 7021-7179 bp
Feature: gene
Location: 10656-11723 bp
Feature: domain
Description: DUF3800
Location: 10659-11523 bp
Feature: domain
Description: DUF3800
Location: 1 0659-1 1 523 bp
Feature: gene
Location: 11780-13489 bp
Feature: gene
Location: 13545-14687 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 13773-14313 bp
Feature: RT
Description: RVT-Retrons
Note: Retrons RT
Location: 1 3773-1 431 3 bp
Feature: gene
Location: 14781-16889 bp
Feature: domain
Description: AAA_21
Location: 14856-15804 bp
Feature: domain
Description: AAA_21
Location: 1 4856-1 5804 bp
Feature: gene
Location: 17002-18666 bp
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Associated domains:
myRT
HsdR (COG4096)
,
RVT-UG1
,
DUF3800 (pfam12686)
,
RVT-Retrons
,
AAA_21 (pfam13304)