myRT

myRT report for GCA_000492515.1_Kleb_pneu_UCI_8_V1

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Seq: KI535488.1 (34306 bp)
Overview 1 RT 1: 29284-33726 bp Neighborhood of RT #1 [29284, 33728] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 29284-30555 bp Feature: domain Description: umuC Location: 29287-30547 bp Feature: domain Description: umuC Location: 29287-30547 bp Feature: gene Location: 30555-31238 bp Feature: domain Description: PRK10276 Location: 30858-31221 bp Feature: domain Description: PRK1 0276 Location: 30858-31 221 bp Feature: gene Location: 31392-32879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31797-32487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 797-32487 bp Feature: gene Location: 33031-33306 bp Feature: domain Description: InsA Location: 33034-33298 bp Feature: domain Description: InsA Location: 33034-33298 bp Feature: gene Location: 33225-33728 bp Feature: domain Description: DDE_Tnp_IS1 Location: 33336-33726 bp Feature: domain Description: DDE_Tnp_IS1 Location: 33336-33726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: KI535495.1 (506416 bp)
Overview 1 RT 1: 321665-332386 bp Neighborhood of RT #1 [321665, 332415] PRK09692 Beta_protein RVT-UG5 PRK04247 RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Feature: gene Location: 321665-322927 bp Feature: domain Description: PRK09692 Location: 321674-322874 bp Feature: domain Description: PRK09692 Location: 32 1674-32 2 874 bp Feature: gene Location: 323694-324722 bp Feature: domain Description: Beta_protein Location: 323712-324702 bp Feature: domain Description: Beta_protein Location: 32 3712 -32 4702 bp Feature: gene Location: 326389-329406 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 326887-327382 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 32 6887-32 7382 bp Feature: gene Location: 329586-330686 bp Feature: domain Description: PRK04247 Location: 329649-329880 bp Feature: domain Description: PRK042 47 Location: 32 9649-32 9880 bp Feature: gene Location: 330697-332415 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 331024-331558 bp Feature: domain Description: RMtype1_S_Ppo2 1ORF8840P_TRD1-CR1_like Location: 33102 4-331558 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 332008-332386 bp Feature: domain Description: RMtype1_S_Ppo2 1ORF8840P_TRD1-CR1_like Location: 332 008-332 386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Beta_protein (pfam14350), RVT-UG5, PRK04247 (endonuclease NucS), RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293)