myRT

myRT report for GCA_000492775.1_Kleb_pneu_MGH_46_V1

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Seq: KI535587.1 (2008287 bp)
Overview 1 RT 1: 467736-474589 bp Neighborhood of RT #1 [467736, 474606] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 467736-468401 bp Feature: domain Description: INT_P4_C Location: 467841-468399 bp Feature: domain Description: INT_P4_C Location: 467841 -468399 bp Feature: gene Location: 468662-469102 bp Feature: domain Description: Integrase_1 Location: 468668-468884 bp Feature: domain Description: Integrase_1 Location: 468668-468884 bp Feature: gene Location: 469159-471237 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 469567-470011 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 469567-47001 1 bp Feature: gene Location: 471237-473846 bp Feature: domain Description: FimD Location: 471294-473835 bp Feature: domain Description: FimD Location: 471 294-473835 bp Feature: gene Location: 473878-474606 bp Feature: domain Description: FimC Location: 473926-474589 bp Feature: domain Description: FimC Location: 473926-474589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: KI535585.1 (3334201 bp)
Overview 1 RT 1: 532509-538979 bp 2 RT 2: 669332-672240 bp Neighborhood of RT #1 [532509, 538993] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [669332, 672350] RVT-GII PRK10276 Feature: gene Location: 532509-533933 bp Feature: domain Description: SbcB Location: 532515-533931 bp Feature: domain Description: SbcB Location: 532 515-533931 bp Feature: gene Location: 534108-535277 bp Feature: domain Description: dacD Location: 534117-535272 bp Feature: domain Description: dacD Location: 534117-5352 72 bp Feature: gene Location: 535794-537281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536199-536889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536199-536889 bp Feature: gene Location: 537363-537836 bp Feature: domain Description: PRK10016 Location: 537366-537825 bp Feature: domain Description: PRK10016 Location: 537366-53782 5 bp Feature: gene Location: 537920-538993 bp Feature: domain Description: YccC Location: 537941-538979 bp Feature: domain Description: YccC Location: 537941-538979 bp Feature: gene Location: 669332-669718 bp Feature: gene Location: 670133-670300 bp Feature: gene Location: 670306-671793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670711-671401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670711-671401 bp Feature: gene Location: 671870-672109 bp Feature: gene Location: 672066-672350 bp Feature: domain Description: PRK10276 Location: 672111-672240 bp Feature: domain Description: PRK102 76 Location: 672 111-672 2 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: KI535590.1 (94195 bp)
Overview 1 RT 1: 25184-30533 bp Neighborhood of RT #1 [25184, 30670] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 25184-26452 bp Feature: domain Description: umuC Location: 25187-26447 bp Feature: domain Description: umuC Location: 25187-26447 bp Feature: gene Location: 26452-27264 bp Feature: domain Description: PRK10276 Location: 26884-27247 bp Feature: domain Description: PRK10276 Location: 26884-27247 bp Feature: gene Location: 27289-28776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27694-28384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27694-283 84 bp Feature: gene Location: 29022-29996 bp Feature: domain Description: StbA Location: 29028-29973 bp Feature: domain Description: StbA Location: 29028-29973 bp Feature: gene Location: 29999-30670 bp Feature: domain Description: Plasmid_stab_B Location: 30014-30221 bp Feature: domain Description: Plasmid_stab_B Location: 3 0014-3 0221 bp Feature: domain Description: Plasmid_stab_B Location: 30326-30533 bp Feature: domain Description: Plasmid_stab_B Location: 3 03 26-3 053 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KI535593.1 (1929 bp)
Overview 1 RT 1: 2-1478 bp Neighborhood of RT #1 [2, 1870] RVT-GII Feature: gene Location: 2-229 bp Feature: gene Location: 383-1870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788-1478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788-14 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII