myRT

myRT report for GCA_000493155.1_Kleb_pneu_MGH_17_V1

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Seq: KI535688.1 (1296835 bp)
Overview 1 RT 1: 491236-498089 bp Neighborhood of RT #1 [491236, 498106] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 491236-491901 bp Feature: domain Description: INT_P4_C Location: 491341-491899 bp Feature: domain Description: INT_P4_C Location: 491 341 -491 899 bp Feature: gene Location: 492162-492602 bp Feature: domain Description: Integrase_1 Location: 492168-492384 bp Feature: domain Description: Integrase_1 Location: 4921 68-492384 bp Feature: gene Location: 492659-494737 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 493067-493511 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 493067-49351 1 bp Feature: gene Location: 494737-497346 bp Feature: domain Description: FimD Location: 494794-497335 bp Feature: domain Description: FimD Location: 494794-497335 bp Feature: gene Location: 497378-498106 bp Feature: domain Description: FimC Location: 497426-498089 bp Feature: domain Description: FimC Location: 497426-498089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: KI535690.1 (448112 bp)
Overview 1 RT 1: 386244-395856 bp Neighborhood of RT #1 [386244, 395972] COG2958 AAA_15 AAA_15 RVT-Retrons COG0610 AAA_13 AAA_13 Feature: gene Location: 386244-387176 bp Feature: domain Description: COG2958 Location: 386262-387156 bp Feature: domain Description: COG2 958 Location: 3862 62 -387156 bp Feature: gene Location: 387750-389867 bp Feature: domain Description: AAA_15 Location: 387753-388170 bp Feature: domain Description: AAA_15 Location: 387753-388170 bp Feature: domain Description: AAA_15 Location: 388308-388734 bp Feature: domain Description: AAA_15 Location: 388308-388734 bp Feature: gene Location: 390040-391140 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 390181-390742 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 390181-390742 bp Feature: gene Location: 391682-394801 bp Feature: domain Description: COG0610 Location: 391766-394778 bp Feature: domain Description: COG0610 Location: 391766-394778 bp Feature: gene Location: 394794-395972 bp Feature: domain Description: AAA_13 Location: 394887-395061 bp Feature: domain Description: AAA_13 Location: 394887-395061 bp Feature: domain Description: AAA_13 Location: 395283-395856 bp Feature: domain Description: AAA_13 Location: 3952 83-395856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2958 (Uncharacterized protein ), AAA_15 (pfam13175), RVT-Retrons, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), AAA_13 (pfam13166)