myRT

myRT report for GCA_000493315.1_Vibrio_harveyi_E385_Genome_sequencing

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Seq: AYKI01000011.1 (765368 bp)
Overview 1 RT 1: 144612-150540 bp Neighborhood of RT #1 [144612, 151442] SLATT_5 RVT-UG17 Phage_Integr_2 Phage_integrase Feature: gene Location: 144612-145292 bp Feature: gene Location: 145739-146368 bp Feature: domain Description: SLATT_5 Location: 145823-146354 bp Feature: domain Description: SLATT_5 Location: 1 45823-1 46354 bp Feature: gene Location: 146358-147671 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 146583-147165 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 46583-1 471 65 bp Feature: gene Location: 147821-148531 bp Feature: gene Location: 148521-151442 bp Feature: domain Description: Phage_Integr_2 Location: 149241-150102 bp Feature: domain Description: Phage_Integr_2 Location: 1 49241 -1 501 02 bp Feature: domain Description: Phage_integrase Location: 150348-150540 bp Feature: domain Description: Phage_integrase Location: 1 50348-1 50540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Phage_Integr_2 (pfam13009), Phage_integrase (pfam00589)

Seq: AYKI01000053.1 (29246 bp)
Overview 1 RT 1: 19645-23974 bp Neighborhood of RT #1 [19645, 24015] GrpB RVT-Retrons DegQ NUDIX AAA_33 Feature: gene Location: 19645-20196 bp Feature: domain Description: GrpB Location: 19711-20182 bp Feature: domain Description: GrpB Location: 19711-2 0182 bp Feature: gene Location: 20342-20857 bp Feature: gene Location: 20963-22663 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21158-21764 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 1158-2 1764 bp Feature: domain Description: DegQ Location: 22139-22607 bp Feature: domain Description: DegQ Location: 2 2 139-2 2 607 bp Feature: gene Location: 22983-23369 bp Feature: domain Description: NUDIX Location: 22989-23346 bp Feature: domain Description: NUDIX Location: 2 2 989-2 3346 bp Feature: gene Location: 23527-24015 bp Feature: domain Description: AAA_33 Location: 23548-23974 bp Feature: domain Description: AAA_33 Location: 2 3548-2 3974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GrpB (pfam04229), RVT-Retrons, DegQ (pfam08181), NUDIX (pfam00293), AAA_33 (pfam13671)