myRT

myRT report for GCA_000493515.1_LhCIRMBIA953V1

Download annotations/find similar RTs

Seq: CBUH010000169.1 Lactobacillus helveticus CIRM-BIA 953 WGS project CBUH000000000 data, contig SCF2491-CONTIG1, whole genome shotgun sequence (98270 bp)
Overview 1 RT 1: 41296-45016 bp 2 RT 2: 90422-94142 bp Neighborhood of RT #1 [41296, 45060] RVT-DGRs Phage_XkdX Neighborhood of RT #2 [90422, 94186] RVT-DGRs Phage_XkdX Feature: gene Location: 41296-42162 bp Feature: gene Location: 42274-42714 bp Feature: gene Location: 42972-44114 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43158-43860 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 431 58-43860 bp Feature: gene Location: 44150-44872 bp Feature: gene Location: 44872-45060 bp Feature: domain Description: Phage_XkdX Location: 44920-45016 bp Feature: domain Description: Phage_XkdX Location: 44920-4501 6 bp Feature: gene Location: 90422-91288 bp Feature: gene Location: 91400-91840 bp Feature: gene Location: 92098-93240 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 92284-92986 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 92284-92986 bp Feature: gene Location: 93276-93998 bp Feature: gene Location: 93998-94186 bp Feature: domain Description: Phage_XkdX Location: 94046-94142 bp Feature: domain Description: Phage_XkdX Location: 94046-941 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693)

Seq: CBUH010000025.1 Lactobacillus helveticus CIRM-BIA 953 WGS project CBUH000000000 data, contig SCF2309-CONTIG1, whole genome shotgun sequence (10862 bp)
Overview 1 RT 1: 2337-7233 bp Neighborhood of RT #1 [2337, 7233] RVT-UG2 RVT-UG2 PRK06807 DEDDh BRCT_DNA_ligase_like Feature: gene Location: 2337-2921 bp Feature: gene Location: 2949-3179 bp Feature: gene Location: 3565-4062 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3772-4048 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3772 -4048 bp Feature: gene Location: 4074-4892 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4080-4614 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4080-4614 bp Feature: gene Location: 4991-5818 bp Feature: domain Description: PRK06807 Location: 5027-5138 bp Feature: domain Description: PRK06807 Location: 502 7-5138 bp Feature: domain Description: DEDDh Location: 5159-5444 bp Feature: domain Description: DEDDh Location: 5159-5444 bp Feature: domain Description: BRCT_DNA_ligase_like Location: 5573-5795 bp Feature: domain Description: BRCT_DNA_ligase_like Location: 5573-5795 bp Feature: gene Location: 6112-7233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, PRK06807 (3'-5' exonuclease), DEDDh (cd06127), BRCT_DNA_ligase_like (cd17748)