myRT

myRT report for GCA_000493965.1_Aminicenantes_bacterium_OTU_1

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Seq: AWNV01000080.1 (11539 bp)
Overview 1 RT 1: 2-1836 bp Neighborhood of RT #1 [2, 1838] RVT-GII DUF4372 DDE_Tnp_1 Feature: gene Location: 2-442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-440 bp Feature: gene Location: 564-740 bp Feature: gene Location: 1164-1838 bp Feature: domain Description: DUF4372 Location: 1173-1392 bp Feature: domain Description: DUF4372 Location: 1 1 73-1 392 bp Feature: domain Description: DDE_Tnp_1 Location: 1533-1836 bp Feature: domain Description: DDE_Tnp_1 Location: 1 533-1 836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF4372 (pfam14294), DDE_Tnp_1 (pfam01609)

Seq: AWNV01000018.1 (51455 bp)
Overview 1 RT 1: 42030-48903 bp Neighborhood of RT #1 [42030, 48903] PRK04247 RVT-Retrons SIR2_2 Feature: gene Location: 42030-43037 bp Feature: gene Location: 43071-44045 bp Feature: domain Description: PRK04247 Location: 43098-43416 bp Feature: domain Description: PRK042 47 Location: 43098-43416 bp Feature: gene Location: 44302-45117 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44422-44974 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4442 2 -44974 bp Feature: gene Location: 46279-47289 bp Feature: domain Description: SIR2_2 Location: 46627-47188 bp Feature: domain Description: SIR2 _2 Location: 4662 7-47188 bp Feature: gene Location: 47698-48903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04247 (endonuclease NucS), RVT-Retrons, SIR2_2 (pfam13289)

Seq: AWNV01000020.1 (46851 bp)
Overview 1 RT 1: 6572-11092 bp Neighborhood of RT #1 [6572, 11097] HTH_32 RVT-GII AzgA PRK02304 Feature: gene Location: 6572-7216 bp Feature: domain Description: HTH_32 Location: 6761-6971 bp Feature: domain Description: HTH_3 2 Location: 6761-6971 bp Feature: gene Location: 7419-7628 bp Feature: gene Location: 7735-9117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8083-8764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8083 -8764 bp Feature: gene Location: 9227-10552 bp Feature: domain Description: AzgA Location: 9233-10547 bp Feature: domain Description: AzgA Location: 923 3 -10547 bp Feature: gene Location: 10561-11097 bp Feature: domain Description: PRK02304 Location: 10573-11092 bp Feature: domain Description: PRK023 04 Location: 10573 -11092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), RVT-GII, AzgA (COG2252), PRK02304 (adenine phosphoribosyltransferase; Provisional)