myRT

myRT report for GCA_000494265.1_Atribacteria_bacterium_OTU_1

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Seq: AWNT01000012.1 (19102 bp)
Overview 1 RT 1: 315-4843 bp Neighborhood of RT #1 [315, 4998] group_II_RT_mat RVT-UG19 AAA_21 Feature: gene Location: 315-734 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 348-612 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 348-61 2 bp Feature: gene Location: 815-2386 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 824-1148 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 824-1 1 48 bp Feature: gene Location: 2528-3358 bp Feature: gene Location: 3886-4998 bp Feature: domain Description: AAA_21 Location: 3970-4843 bp Feature: domain Description: AAA_21 Location: 3970-4843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-UG19, AAA_21 (pfam13304)

Seq: AWNT01000028.1 (34208 bp)
Overview 1 RT 1: 17161-22557 bp Neighborhood of RT #1 [17161, 22571] LicD LicD RVT-GII RVT-GII PLN02653 GT4_WbnK-like Feature: gene Location: 17161-17841 bp Feature: domain Description: LicD Location: 17326-17416 bp Feature: domain Description: LicD Location: 1732 6-17416 bp Feature: domain Description: LicD Location: 17578-17692 bp Feature: domain Description: LicD Location: 17578-17692 bp Feature: gene Location: 17954-18148 bp Feature: gene Location: 18412-18918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18760-18868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18760-18868 bp Feature: gene Location: 18960-19463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18963-19377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18963-19377 bp Feature: gene Location: 20068-21057 bp Feature: domain Description: PLN02653 Location: 20074-21037 bp Feature: domain Description: PLN02 653 Location: 2 0074-2 1037 bp Feature: gene Location: 21480-22571 bp Feature: domain Description: GT4_WbnK-like Location: 21498-22557 bp Feature: domain Description: GT4_WbnK-like Location: 2 1498-2 2 557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LicD (pfam04991), RVT-GII, PLN02653 (GDP-mannose 4,6-dehydratase), GT4_WbnK-like (cd03807)

Seq: AWNT01000061.1 (16400 bp)
Overview 1 RT 1: 397-4602 bp Neighborhood of RT #1 [397, 4619] Tas RVT-GII GIIM RAYT Feature: gene Location: 397-561 bp Feature: gene Location: 1326-2297 bp Feature: domain Description: Tas Location: 1329-2253 bp Feature: domain Description: Tas Location: 13 29-2253 bp Feature: gene Location: 2377-3933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2869-3487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2869-3 487 bp Feature: domain Description: GIIM Note: maturase Location: 3538-3751 bp Feature: domain Description: GIIM Note: maturase Location: 3 53 8-3 751 bp Feature: gene Location: 4084-4323 bp Feature: gene Location: 4395-4619 bp Feature: domain Description: RAYT Location: 4404-4602 bp Feature: domain Description: RAYT Location: 4404-4602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tas (COG0667), RVT-GII, GIIM (pfam08388), RAYT (COG1943)

Seq: AWNT01000065.1 (8770 bp)
Overview 1 RT 1: 6321-8759 bp Neighborhood of RT #1 [6321, 8767] AbiEi_4 RVT-GII Feature: gene Location: 6321-6527 bp Feature: gene Location: 6789-7358 bp Feature: domain Description: AbiEi_4 Location: 6867-7011 bp Feature: domain Description: AbiEi_4 Location: 6867-7011 bp Feature: gene Location: 7913-8767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8336-8759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8336-8759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEi_4 (pfam13338), RVT-GII

Seq: AWNT01000092.1 (7107 bp)
Overview 1 RT 1: 214-4812 bp Neighborhood of RT #1 [214, 4823] RpfG InsE RVT-GII GIIM PHA02517 PRK09183 Feature: gene Location: 214-1344 bp Feature: domain Description: RpfG Location: 634-1336 bp Feature: domain Description: RpfG Location: 634-1336 bp Feature: gene Location: 1469-1783 bp Feature: domain Description: InsE Location: 1499-1775 bp Feature: domain Description: InsE Location: 1499-1775 bp Feature: gene Location: 2301-3548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2505-3162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 05 -3162 bp Feature: domain Description: GIIM Note: maturase Location: 3249-3459 bp Feature: domain Description: GIIM Note: maturase Location: 3249-345 9 bp Feature: gene Location: 3643-4017 bp Feature: domain Description: PHA02517 Location: 3709-4012 bp Feature: domain Description: PHA025 17 Location: 3709-4012 bp Feature: gene Location: 4083-4823 bp Feature: domain Description: PRK09183 Location: 4092-4812 bp Feature: domain Description: PRK09183 Location: 4092-4812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpfG (COG3437), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK09183 (transposase/IS protein; Provisional)

Seq: AWNT01000095.1 (8517 bp)
Overview 1 RT 1: 436-3151 bp Neighborhood of RT #1 [436, 3159] RVT-GII PEP_hydrolase Feature: gene Location: 436-1779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748-1411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748-1411 bp Feature: gene Location: 1919-2149 bp Feature: gene Location: 2323-3159 bp Feature: domain Description: PEP_hydrolase Location: 2350-3151 bp Feature: domain Description: PEP_hydrolase Location: 2350-3151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PEP_hydrolase (pfam09370)

Seq: AWNT01000075.1 (12146 bp)
Overview 1 RT 1: 2-2581 bp Neighborhood of RT #1 [2, 2622] RVT-GII RhaT Y1_Tnp Feature: gene Location: 2-571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-569 bp Feature: gene Location: 1247-1744 bp Feature: domain Description: RhaT Location: 1262-1733 bp Feature: domain Description: RhaT Location: 1262-17 33 bp Feature: gene Location: 2281-2622 bp Feature: domain Description: Y1_Tnp Location: 2299-2581 bp Feature: domain Description: Y1_Tnp Location: 2299-2581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RhaT (TIGR00776), Y1_Tnp (pfam01797)

Seq: AWNT01000078.1 (11887 bp)
Overview 1 RT 1: 30-4666 bp Neighborhood of RT #1 [30, 4680] RVT-GII Tm-1-like PepP Feature: gene Location: 30-263 bp Feature: gene Location: 402-1760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708 -138 9 bp Feature: gene Location: 1878-3122 bp Feature: domain Description: Tm-1-like Location: 1896-3108 bp Feature: domain Description: Tm-1-like Location: 18 96-3108 bp Feature: gene Location: 3451-4680 bp Feature: domain Description: PepP Location: 3556-4666 bp Feature: domain Description: PepP Location: 3556-4666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Tm-1-like (cl02262), PepP (COG0006)

Seq: AWNT01000011.1 (6548 bp)
Overview 1 RT 1: 494-3010 bp Neighborhood of RT #1 [494, 3045] RVT-GII GIIM HTH_32 YjiL Feature: gene Location: 494-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749-1415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749 -1415 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1685 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1685 bp Feature: gene Location: 2016-2408 bp Feature: domain Description: HTH_32 Location: 2151-2376 bp Feature: domain Description: HTH_32 Location: 2151-2376 bp Feature: gene Location: 2776-3045 bp Feature: domain Description: YjiL Location: 2833-3010 bp Feature: domain Description: YjiL Location: 2833-3010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565), YjiL (COG1924)

Seq: AWNT01000019.1 (12571 bp)
Overview 1 RT 1: 613-6455 bp Neighborhood of RT #1 [613, 6466] nusA RVT-GII DUF448 infB IF-2 Feature: gene Location: 613-1695 bp Feature: domain Description: nusA Location: 625-1666 bp Feature: domain Description: nusA Location: 625-1666 bp Feature: gene Location: 2579-3889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2849-3509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2849-3509 bp Feature: gene Location: 4097-4336 bp Feature: domain Description: DUF448 Location: 4127-4322 bp Feature: domain Description: DUF448 Location: 4127-4322 bp Feature: gene Location: 4520-6466 bp Feature: domain Description: infB Location: 4526-4709 bp Feature: domain Description: infB Location: 4526-4709 bp Feature: domain Description: IF-2 Location: 4721-6455 bp Feature: domain Description: IF-2 Location: 4721-6455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nusA (PRK12329), RVT-GII, DUF448 (pfam04296), infB (PRK05306), IF-2 (TIGR00487)