myRT

myRT report for GCA_000495915.1_PseChl

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Seq: AOFQ01000011.1 (49302 bp)
Overview 1 RT 1: 38726-41778 bp Neighborhood of RT #1 [38726, 41778] RVT-GII GIIM Feature: gene Location: 38726-38971 bp Feature: gene Location: 39108-39458 bp Feature: gene Location: 39660-40985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39921-40536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39921 -40536 bp Feature: domain Description: GIIM Note: maturase Location: 40590-40818 bp Feature: domain Description: GIIM Note: maturase Location: 40590-4081 8 bp Feature: gene Location: 40921-41400 bp Feature: gene Location: 41590-41778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000029.1 (93615 bp)
Overview 1 RT 1: 48860-56542 bp Neighborhood of RT #1 [48860, 56580] PTZ00456 RVT-GII GIIM GGDEF PTZ00456 Feature: gene Location: 48860-49108 bp Feature: gene Location: 49323-51287 bp Feature: domain Description: PTZ00456 Location: 49491-51276 bp Feature: domain Description: PTZ00456 Location: 49491-512 76 bp Feature: gene Location: 51864-53189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52125-52740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 12 5-52 740 bp Feature: domain Description: GIIM Note: maturase Location: 52794-53022 bp Feature: domain Description: GIIM Note: maturase Location: 52 794-5302 2 bp Feature: gene Location: 53196-54662 bp Feature: domain Description: GGDEF Location: 54105-54609 bp Feature: domain Description: GGDEF Location: 54105-54609 bp Feature: gene Location: 54802-56580 bp Feature: domain Description: PTZ00456 Location: 54811-56542 bp Feature: domain Description: PTZ00456 Location: 54811-56542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000027.1 (53835 bp)
Overview 1 RT 1: 28786-33631 bp Neighborhood of RT #1 [28786, 33636] SpeE AroG2 RVT-GII GIIM PRK00529 Feature: gene Location: 28786-29535 bp Feature: domain Description: SpeE Location: 28795-29521 bp Feature: domain Description: SpeE Location: 28795-29521 bp Feature: gene Location: 29668-31017 bp Feature: domain Description: AroG2 Location: 29671-31003 bp Feature: domain Description: AroG2 Location: 29671-3 1003 bp Feature: gene Location: 31163-32488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31424-32039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1424-3 203 9 bp Feature: domain Description: GIIM Note: maturase Location: 32093-32321 bp Feature: domain Description: GIIM Note: maturase Location: 3 2093 -3 23 21 bp Feature: gene Location: 32424-32903 bp Feature: gene Location: 33070-33636 bp Feature: domain Description: PRK00529 Location: 33073-33631 bp Feature: domain Description: PRK00529 Location: 3 3 073 -3 3 63 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000021.1 (25502 bp)
Overview 1 RT 1: 8318-13686 bp Neighborhood of RT #1 [8318, 13706] rpsA RVT-GII GIIM MarR ARO8 Feature: gene Location: 8318-10000 bp Feature: domain Description: rpsA Location: 8321-9992 bp Feature: domain Description: rpsA Location: 8321-9992 bp Feature: gene Location: 10160-10639 bp Feature: gene Location: 10575-11900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10836-11451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10836-114 51 bp Feature: domain Description: GIIM Note: maturase Location: 11505-11733 bp Feature: domain Description: GIIM Note: maturase Location: 11505-11733 bp Feature: gene Location: 12016-12459 bp Feature: domain Description: MarR Location: 12082-12409 bp Feature: domain Description: MarR Location: 12082-124 09 bp Feature: gene Location: 12534-13706 bp Feature: domain Description: ARO8 Location: 12588-13686 bp Feature: domain Description: ARO8 Location: 12588-13686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000058.1 (121752 bp)
Overview 1 RT 1: 102666-107915 bp 2 RT 2: 117770-121734 bp Neighborhood of RT #1 [102666, 107920] PRK15114 PRK10757 RVT-GII GIIM PRK13339 Neighborhood of RT #2 [117770, 121751] ParE Rho_N Bfr RVT-GII GIIM LpxC Feature: gene Location: 102666-103502 bp Feature: domain Description: PRK15114 Location: 102735-103473 bp Feature: domain Description: PRK15 114 Location: 102735 -103473 bp Feature: gene Location: 103597-104412 bp Feature: domain Description: PRK10757 Location: 103600-104410 bp Feature: domain Description: PRK1075 7 Location: 103600-104410 bp Feature: gene Location: 104496-105821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104757-105372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10475 7-105 372 bp Feature: domain Description: GIIM Note: maturase Location: 105426-105654 bp Feature: domain Description: GIIM Note: maturase Location: 105 426-105 65 4 bp Feature: gene Location: 105757-106236 bp Feature: gene Location: 106409-107920 bp Feature: domain Description: PRK13339 Location: 106445-107915 bp Feature: domain Description: PRK13339 Location: 106445 -107915 bp Feature: gene Location: 117770-118168 bp Feature: domain Description: ParE Location: 117791-117995 bp Feature: domain Description: ParE Location: 117791-117995 bp Feature: domain Description: Rho_N Location: 118067-118160 bp Feature: domain Description: Rho_N Location: 118067-118160 bp Feature: gene Location: 118342-118917 bp Feature: domain Description: Bfr Location: 118486-118909 bp Feature: domain Description: Bfr Location: 118486-118909 bp Feature: gene Location: 119057-120382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119318-119933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119318-119933 bp Feature: domain Description: GIIM Note: maturase Location: 119987-120215 bp Feature: domain Description: GIIM Note: maturase Location: 119987-120215 bp Feature: gene Location: 120318-120797 bp Feature: gene Location: 120963-121751 bp Feature: domain Description: LpxC Location: 120969-121734 bp Feature: domain Description: LpxC Location: 120969-121734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000056.1 (123765 bp)
Overview 1 RT 1: 74520-78979 bp Neighborhood of RT #1 [74520, 78979] GLY1 PrpB RVT-GII GIIM Feature: gene Location: 74520-75566 bp Feature: domain Description: GLY1 Location: 74538-75549 bp Feature: domain Description: GLY1 Location: 74538-75549 bp Feature: gene Location: 75920-76756 bp Feature: domain Description: PrpB Location: 75941-76709 bp Feature: domain Description: PrpB Location: 75941-76 709 bp Feature: gene Location: 76901-78226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77162-77777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7716 2-77777 bp Feature: domain Description: GIIM Note: maturase Location: 77831-78059 bp Feature: domain Description: GIIM Note: maturase Location: 77831-78059 bp Feature: gene Location: 78162-78641 bp Feature: gene Location: 78740-78979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000031.1 (121622 bp)
Overview 1 RT 1: 37029-44749 bp Neighborhood of RT #1 [37029, 44749] PTZ00456 GGDEF RVT-GII GIIM PTZ00456 Feature: gene Location: 37029-38807 bp Feature: domain Description: PTZ00456 Location: 37038-38769 bp Feature: domain Description: PTZ00456 Location: 37 038-387 69 bp Feature: gene Location: 38947-40413 bp Feature: domain Description: GGDEF Location: 39856-40360 bp Feature: domain Description: GGDEF Location: 39856-40360 bp Feature: gene Location: 40420-41745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40681-41296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40681-41296 bp Feature: domain Description: GIIM Note: maturase Location: 41350-41578 bp Feature: domain Description: GIIM Note: maturase Location: 41350-4157 8 bp Feature: gene Location: 42322-44286 bp Feature: domain Description: PTZ00456 Location: 42490-44275 bp Feature: domain Description: PTZ00456 Location: 42490-4427 5 bp Feature: gene Location: 44501-44749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000012.1 (14559 bp)
Overview 1 RT 1: 12443-14559 bp Neighborhood of RT #1 [12443, 14558] LpxC RVT-GII Feature: gene Location: 12443-13354 bp Feature: domain Description: LpxC Location: 12446-13337 bp Feature: domain Description: LpxC Location: 12446-13337 bp Feature: gene Location: 13520-13999 bp Feature: gene Location: 13935-14558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14196-14559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14196-14559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000041.1 (74774 bp)
Overview 1 RT 1: 31864-36684 bp Neighborhood of RT #1 [31864, 36722] KatE RVT-GII GIIM RplQ Feature: gene Location: 31864-32688 bp Feature: gene Location: 32758-34287 bp Feature: domain Description: KatE Location: 32833-34276 bp Feature: domain Description: KatE Location: 32833-34276 bp Feature: gene Location: 34434-35816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34752-35367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34752-35367 bp Feature: domain Description: GIIM Note: maturase Location: 35421-35649 bp Feature: domain Description: GIIM Note: maturase Location: 35421-35649 bp Feature: gene Location: 35695-36174 bp Feature: gene Location: 36336-36722 bp Feature: domain Description: RplQ Location: 36339-36684 bp Feature: domain Description: RplQ Location: 36339 -36684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000049.1 (60609 bp)
Overview 1 RT 1: 35558-43827 bp Neighborhood of RT #1 [35558, 43835] COG3178 RVT_N RVT-GII GIIM HNH LptD PRK10770 Feature: gene Location: 35558-36616 bp Feature: domain Description: COG3178 Location: 35606-36599 bp Feature: domain Description: COG3178 Location: 35606-36599 bp Feature: gene Location: 37654-37809 bp Feature: gene Location: 37926-39632 bp Feature: domain Description: RVT_N Location: 37983-38223 bp Feature: domain Description: RVT_N Location: 37983-38223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38271-38904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38271-38904 bp Feature: domain Description: GIIM Note: maturase Location: 38958-39192 bp Feature: domain Description: GIIM Note: maturase Location: 38958-39192 bp Feature: domain Description: HNH Note: nucleases Location: 39444-39576 bp Feature: domain Description: HNH Note: nucleases Location: 39444-39576 bp Feature: gene Location: 39686-42547 bp Feature: domain Description: LptD Location: 40133-42530 bp Feature: domain Description: LptD Location: 40133-42530 bp Feature: gene Location: 42639-43835 bp Feature: domain Description: PRK10770 Location: 42645-43827 bp Feature: domain Description: PRK10 770 Location: 42645-43827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000039.1 (35791 bp)
Overview 1 RT 1: 22256-26366 bp Neighborhood of RT #1 [22256, 26368] YccA_like RVT-GII GIIM PRK00207 PRK00211 Feature: gene Location: 22256-22420 bp Feature: gene Location: 22935-23603 bp Feature: domain Description: YccA_like Location: 22986-23592 bp Feature: domain Description: YccA_like Location: 22986-23592 bp Feature: gene Location: 24175-25500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24436-25051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24436-25051 bp Feature: domain Description: GIIM Note: maturase Location: 25105-25333 bp Feature: domain Description: GIIM Note: maturase Location: 25105-25333 bp Feature: gene Location: 25617-26009 bp Feature: domain Description: PRK00207 Location: 25620-25998 bp Feature: domain Description: PRK00207 Location: 25620-25998 bp Feature: gene Location: 26009-26368 bp Feature: domain Description: PRK00211 Location: 26018-26366 bp Feature: domain Description: PRK00211 Location: 26018-26366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000032.1 (221301 bp)
Overview 1 RT 1: 38551-42878 bp Neighborhood of RT #1 [38551, 42886] PRK07035 YcbJ RVT-GII GIIM SCP2 Feature: gene Location: 38551-39318 bp Feature: domain Description: PRK07035 Location: 38566-39313 bp Feature: domain Description: PRK07035 Location: 38566-39313 bp Feature: gene Location: 39374-40441 bp Feature: domain Description: YcbJ Location: 39404-40394 bp Feature: domain Description: YcbJ Location: 39404-40394 bp Feature: gene Location: 40660-41985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40921-41536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40921-41536 bp Feature: domain Description: GIIM Note: maturase Location: 41590-41818 bp Feature: domain Description: GIIM Note: maturase Location: 41590-41818 bp Feature: gene Location: 41921-42400 bp Feature: gene Location: 42572-42886 bp Feature: domain Description: SCP2 Location: 42623-42878 bp Feature: domain Description: SCP2 Location: 42623-42878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000057.1 (108014 bp)
Overview 1 RT 1: 49886-55389 bp Neighborhood of RT #1 [49886, 55406] PRK10634 Smf RVT-GII GIIM XkdP def Feature: gene Location: 49886-50557 bp Feature: domain Description: PRK10634 Location: 50021-50549 bp Feature: domain Description: PRK10634 Location: 50021-50549 bp Feature: gene Location: 50619-51725 bp Feature: domain Description: Smf Location: 50649-51714 bp Feature: domain Description: Smf Location: 50649-51714 bp Feature: gene Location: 51838-53163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52099-52714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52099-52714 bp Feature: domain Description: GIIM Note: maturase Location: 52768-52996 bp Feature: domain Description: GIIM Note: maturase Location: 52768-52996 bp Feature: gene Location: 53726-54751 bp Feature: domain Description: XkdP Location: 53747-54707 bp Feature: domain Description: XkdP Location: 53747-54707 bp Feature: gene Location: 54900-55406 bp Feature: domain Description: def Location: 54903-55389 bp Feature: domain Description: def Location: 54903-55389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000014.1 (41783 bp)
Overview 1 RT 1: 32437-39825 bp Neighborhood of RT #1 [32437, 39833] lipid_A_lpxH PRK10791 RVT_N RVT-GII YkfC HNHc PRK05347 cysS Feature: gene Location: 32437-33159 bp Feature: domain Description: lipid_A_lpxH Location: 32446-33130 bp Feature: domain Description: lipid_A_lpxH Location: 32446-33130 bp Feature: gene Location: 33166-33660 bp Feature: domain Description: PRK10791 Location: 33169-33655 bp Feature: domain Description: PRK10791 Location: 33169-33655 bp Feature: gene Location: 34867-36606 bp Feature: domain Description: RVT_N Location: 34927-35170 bp Feature: domain Description: RVT_N Location: 34927-35170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35218-35869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35218-35869 bp Feature: domain Description: YkfC Location: 36091-36223 bp Feature: domain Description: YkfC Location: 36091-36223 bp Feature: domain Description: HNHc Note: nucleases Location: 36403-36559 bp Feature: domain Description: HNHc Note: nucleases Location: 36403-36559 bp Feature: gene Location: 36619-38448 bp Feature: domain Description: PRK05347 Location: 36796-38443 bp Feature: domain Description: PRK05347 Location: 36796-38443 bp Feature: gene Location: 38448-39833 bp Feature: domain Description: cysS Location: 38451-39825 bp Feature: domain Description: cysS Location: 38451-39825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AOFQ01000007.1 (185765 bp)
Overview 1 RT 1: 11409-19381 bp 2 RT 2: 44810-49114 bp 3 RT 3: 150548-154997 bp Neighborhood of RT #1 [11409, 19386] DUF1302 DUF1329 RVT-GII GIIM MalT Neighborhood of RT #2 [44810, 49114] groES groEL RVT-GII GIIM Neighborhood of RT #3 [150548, 155014] secF YcfJ RVT-GII GIIM Lipoprotein_16 Feature: gene Location: 11409-13127 bp Feature: domain Description: DUF1302 Location: 11415-13125 bp Feature: domain Description: DUF1302 Location: 11415 -13125 bp Feature: gene Location: 13250-14590 bp Feature: domain Description: DUF1329 Location: 13475-14573 bp Feature: domain Description: DUF1329 Location: 13475-14573 bp Feature: gene Location: 15171-16496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15432-16047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 432-16047 bp Feature: domain Description: GIIM Note: maturase Location: 16101-16329 bp Feature: domain Description: GIIM Note: maturase Location: 16101-16329 bp Feature: gene Location: 16503-16742 bp Feature: gene Location: 16765-19386 bp Feature: domain Description: MalT Location: 16828-19381 bp Feature: domain Description: MalT Location: 16828-19381 bp Feature: gene Location: 44810-45103 bp Feature: domain Description: groES Location: 44813-45098 bp Feature: domain Description: groES Location: 44813-45098 bp Feature: gene Location: 45153-46802 bp Feature: domain Description: groEL Location: 45159-46770 bp Feature: domain Description: groEL Location: 4515 9-46770 bp Feature: gene Location: 47384-48709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47645-48260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47645-48260 bp Feature: domain Description: GIIM Note: maturase Location: 48314-48542 bp Feature: domain Description: GIIM Note: maturase Location: 48314-48542 bp Feature: gene Location: 48716-48850 bp Feature: gene Location: 48893-49114 bp Feature: gene Location: 150548-151459 bp Feature: domain Description: secF Location: 150557-151412 bp Feature: domain Description: secF Location: 15 0557-15 1412 bp Feature: gene Location: 151536-152069 bp Feature: domain Description: YcfJ Location: 151539-152064 bp Feature: domain Description: YcfJ Location: 15 15 39-15 2064 bp Feature: gene Location: 152649-153974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152910-153525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 2910-15 3525 bp Feature: domain Description: GIIM Note: maturase Location: 153579-153807 bp Feature: domain Description: GIIM Note: maturase Location: 15 3579-15 3807 bp Feature: gene Location: 154070-154261 bp Feature: gene Location: 154430-155014 bp Feature: domain Description: Lipoprotein_16 Location: 154523-154997 bp Feature: domain Description: Lipoprotein_16 Location: 15 4523-15 4997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT