myRT

myRT report for GCA_000496325.1_MDRPA05

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Seq: AXZJ01000094.1 (157720 bp)
Overview 1 RT 1: 82602-89511 bp Neighborhood of RT #1 [82602, 89525] COG3178 RVT_N RVT-GII YkfC HNH LptD LptD Feature: gene Location: 82602-83618 bp Feature: domain Description: COG3178 Location: 82605-83604 bp Feature: domain Description: COG31 78 Location: 82605-83604 bp Feature: gene Location: 83915-84049 bp Feature: gene Location: 84891-86603 bp Feature: domain Description: RVT_N Location: 84948-85191 bp Feature: domain Description: RVT_N Location: 84948-851 91 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85236-85869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85236-85869 bp Feature: domain Description: YkfC Location: 86082-86232 bp Feature: domain Description: YkfC Location: 86082-86232 bp Feature: domain Description: HNH Note: nucleases Location: 86409-86547 bp Feature: domain Description: HNH Note: nucleases Location: 86409-86547 bp Feature: gene Location: 86737-88833 bp Feature: domain Description: LptD Location: 86932-88822 bp Feature: domain Description: LptD Location: 86932-88822 bp Feature: gene Location: 89115-89525 bp Feature: domain Description: LptD Location: 89181-89511 bp Feature: domain Description: LptD Location: 891 81 -8951 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452)

Seq: AXZJ01000035.1 (76950 bp)
Overview 1 RT 1: 59676-66297 bp Neighborhood of RT #1 [59676, 66359] PRK06333 PRK06333 RVT-UG2 YHI9 STN TonB-siderophor Feature: gene Location: 59676-60512 bp Feature: domain Description: PRK06333 Location: 59682-60363 bp Feature: domain Description: PRK06333 Location: 59682 -60363 bp Feature: gene Location: 60551-60943 bp Feature: domain Description: PRK06333 Location: 60554-60941 bp Feature: domain Description: PRK06333 Location: 60554-60941 bp Feature: gene Location: 61650-62789 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 61692-62478 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 61692 -62 478 bp Feature: gene Location: 62961-63797 bp Feature: domain Description: YHI9 Location: 62973-63789 bp Feature: domain Description: YHI9 Location: 62 973-63789 bp Feature: gene Location: 63957-66359 bp Feature: domain Description: STN Location: 64077-64230 bp Feature: domain Description: STN Location: 64077-642 30 bp Feature: domain Description: TonB-siderophor Location: 64338-66297 bp Feature: domain Description: TonB-siderophor Location: 64338-662 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2, YHI9 (COG0384), STN (smart00965), TonB-siderophor (TIGR01783)

Seq: AXZJ01000105.1 (67276 bp)
Overview 1 RT 1: 139-7361 bp Neighborhood of RT #1 [139, 7361] RVT_N RVT-GII YkfC HNH Feature: gene Location: 139-273 bp Feature: gene Location: 1115-2827 bp Feature: domain Description: RVT_N Location: 1172-1415 bp Feature: domain Description: RVT_N Location: 1172-1415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1460-2093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1460-2093 bp Feature: domain Description: YkfC Location: 2306-2456 bp Feature: domain Description: YkfC Location: 23 06-2456 bp Feature: domain Description: HNH Note: nucleases Location: 2633-2771 bp Feature: domain Description: HNH Note: nucleases Location: 263 3 -2771 bp Feature: gene Location: 2872-6273 bp Feature: gene Location: 7224-7361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844)

Seq: AXZJ01000080.1 (27254 bp)
Overview 1 RT 1: 16683-22426 bp Neighborhood of RT #1 [16683, 22443] RVT_N RVT-GII YkfC HNH DUF4158 DDE_Tnp_Tn3 SR_ResInv Feature: gene Location: 16683-16817 bp Feature: gene Location: 17159-17461 bp Feature: gene Location: 18318-20018 bp Feature: domain Description: RVT_N Location: 18375-18618 bp Feature: domain Description: RVT_N Location: 18375-18618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18663-19296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18663-19296 bp Feature: domain Description: YkfC Location: 19509-19659 bp Feature: domain Description: YkfC Location: 19509-19659 bp Feature: domain Description: HNH Note: nucleases Location: 19836-19962 bp Feature: domain Description: HNH Note: nucleases Location: 19836-19962 bp Feature: gene Location: 20210-22108 bp Feature: domain Description: DUF4158 Location: 20231-20738 bp Feature: domain Description: DUF4 158 Location: 20231-20738 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 21941-22094 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 2194 1-22094 bp Feature: gene Location: 22234-22443 bp Feature: domain Description: SR_ResInv Location: 22243-22426 bp Feature: domain Description: SR_ResInv Location: 2224 3-224 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526), SR_ResInv (cd03768)