myRT

myRT report for GCA_000498015.1_TAE79

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Seq: AUTL01000126.1 (20087 bp)
Overview 1 RT 1: 1-1263 bp Neighborhood of RT #1 [1, 1263] RVT-GII Feature: gene Location: 1-162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-1 48 bp Feature: gene Location: 261-410 bp Feature: gene Location: 1069-1263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AUTL01000221.1 (134373 bp)
Overview 1 RT 1: 103476-109306 bp Neighborhood of RT #1 [103476, 109341] PRK15441 GRX_GRXb_1_3_like RVT-UG15 DsbA_FrnE PepP Feature: gene Location: 103476-103754 bp Feature: domain Description: PRK15441 Location: 103479-103749 bp Feature: domain Description: PRK15441 Location: 103479-103749 bp Feature: gene Location: 103816-104547 bp Feature: domain Description: GRX_GRXb_1_3_like Location: 103861-104044 bp Feature: domain Description: GRX_GRXb_1_3_like Location: 103861-104044 bp Feature: gene Location: 105524-107116 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 105935-106337 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 105935-106337 bp Feature: gene Location: 107347-108006 bp Feature: domain Description: DsbA_FrnE Location: 107365-107968 bp Feature: domain Description: DsbA_FrnE Location: 107365-107968 bp Feature: gene Location: 108121-109341 bp Feature: domain Description: PepP Location: 108214-109306 bp Feature: domain Description: PepP Location: 1082 14-109306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15441 (peptidyl-prolyl cis-trans isomerase C; Provisional), GRX_GRXb_1_3_like (cd03418), RVT-UG15, DsbA_FrnE (cd03024), PepP (COG0006)

Seq: AUTL01000225.1 (7148 bp)
Overview 1 RT 1: 4148-6898 bp Neighborhood of RT #1 [4148, 7077] PiuB RVT-GII GIIM Feature: gene Location: 4148-4318 bp Feature: gene Location: 4326-5282 bp Feature: domain Description: PiuB Location: 4473-5247 bp Feature: domain Description: PiuB Location: 4473 -5247 bp Feature: gene Location: 5722-7077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6016-6640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6016-6640 bp Feature: domain Description: GIIM Note: maturase Location: 6679-6898 bp Feature: domain Description: GIIM Note: maturase Location: 6679-6898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PiuB (COG3182), RVT-GII, GIIM (pfam08388)

Seq: AUTL01000233.1 (25422 bp)
Overview 1 RT 1: 4570-8182 bp Neighborhood of RT #1 [4570, 8706] xerC RVT-UG7 Rhs_assc_core Feature: gene Location: 4570-5523 bp Feature: domain Description: xerC Location: 4600-5497 bp Feature: domain Description: xerC Location: 4 600-54 97 bp Feature: gene Location: 5608-5748 bp Feature: gene Location: 5831-7246 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 6056-6446 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 6056-64 4 6 bp Feature: gene Location: 7234-7995 bp Feature: gene Location: 8047-8706 bp Feature: domain Description: Rhs_assc_core Location: 8050-8182 bp Feature: domain Description: Rhs_assc_core Location: 8050-8182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), RVT-UG7, Rhs_assc_core (TIGR03696)

Seq: AUTL01000260.1 (17285 bp)
Overview 1 RT 1: 4704-8503 bp Neighborhood of RT #1 [4704, 8503] RVT-Retrons Feature: gene Location: 4704-5222 bp Feature: gene Location: 5710-6522 bp Feature: gene Location: 7057-8031 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7240-7774 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7240-7774 bp Feature: gene Location: 8052-8231 bp Feature: gene Location: 8345-8503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: AUTL01000145.1 (3876 bp)
Overview 1 RT 1: 1555-3613 bp Neighborhood of RT #1 [1555, 3783] HTH_Tnp_1 HTH_Tnp_1 HTH_32 PHA02517 RVT-GII GIIM Feature: gene Location: 1555-2061 bp Feature: domain Description: HTH_Tnp_1 Location: 1561-1726 bp Feature: domain Description: HTH_Tnp_1 Location: 156 1-1726 bp Feature: domain Description: HTH_Tnp_1 Location: 1750-1972 bp Feature: domain Description: HTH_Tnp_1 Location: 1750-1972 bp Feature: gene Location: 2085-3101 bp Feature: domain Description: HTH_32 Location: 2166-2382 bp Feature: domain Description: HTH_32 Location: 216 6 -2382 bp Feature: domain Description: PHA02517 Location: 2406-2940 bp Feature: domain Description: PHA02517 Location: 2406 -2940 bp Feature: gene Location: 3127-3783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3142-3337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3142-3337 bp Feature: domain Description: GIIM Note: maturase Location: 3394-3613 bp Feature: domain Description: GIIM Note: maturase Location: 3394-36 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), HTH_32 (pfam13565), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AUTL01000261.1 (818 bp)
Overview 1 RT 1: 72-636 bp Neighborhood of RT #1 [72, 815] RVT-GII GIIM Feature: gene Location: 72-815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-37 8 bp Feature: domain Description: GIIM Note: maturase Location: 417-636 bp Feature: domain Description: GIIM Note: maturase Location: 417 -636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AUTL01000086.1 (3585 bp)
Overview 1 RT 1: 51-3529 bp Neighborhood of RT #1 [51, 3546] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 51-371 bp Feature: domain Description: InsE Location: 60-363 bp Feature: domain Description: InsE Location: 60-363 bp Feature: gene Location: 374-814 bp Feature: domain Description: PHA02517 Location: 437-791 bp Feature: domain Description: PHA02517 Location: 437-791 bp Feature: gene Location: 1454-2977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1727-2459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1727-2459 bp Feature: domain Description: GIIM Note: maturase Location: 2531-2732 bp Feature: domain Description: GIIM Note: maturase Location: 2531-2732 bp Feature: gene Location: 3103-3546 bp Feature: domain Description: PHA02517 Location: 3106-3529 bp Feature: domain Description: PHA02517 Location: 3106-3529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)