myRT

myRT report for GCA_000498035.1_TAE80

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Seq: AUTM01000093.1 (102030 bp)
Overview 1 RT 1: 21558-27418 bp Neighborhood of RT #1 [21558, 27423] PepP DsbA_FrnE RVT-UG15 GRX_GRXb_1_3_like PRK15441 Feature: gene Location: 21558-22778 bp Feature: domain Description: PepP Location: 21651-22743 bp Feature: domain Description: PepP Location: 21 651 -22743 bp Feature: gene Location: 22893-23552 bp Feature: domain Description: DsbA_FrnE Location: 22911-23514 bp Feature: domain Description: DsbA_FrnE Location: 2291 1 -2351 4 bp Feature: gene Location: 23783-25375 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 24194-24596 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 241 94-24596 bp Feature: gene Location: 26352-27083 bp Feature: domain Description: GRX_GRXb_1_3_like Location: 26397-26580 bp Feature: domain Description: GRX_GRXb_1 _3_like Location: 26397-26580 bp Feature: gene Location: 27145-27423 bp Feature: domain Description: PRK15441 Location: 27148-27418 bp Feature: domain Description: PRK1 5441 Location: 271 48-2741 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepP (COG0006), DsbA_FrnE (cd03024), RVT-UG15, GRX_GRXb_1_3_like (cd03418), PRK15441 (peptidyl-prolyl cis-trans isomerase C; Provisional)

Seq: AUTM01000062.1 (670 bp)
Overview 1 RT 1: 3-357 bp Neighborhood of RT #1 [3, 356] RVT-GII Feature: gene Location: 3-356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 16-357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AUTM01000341.1 (25434 bp)
Overview 1 RT 1: 16723-20833 bp Neighborhood of RT #1 [16723, 20859] Rhs_assc_core RVT-UG7 xerC Feature: gene Location: 16723-17382 bp Feature: domain Description: Rhs_assc_core Location: 16726-16858 bp Feature: domain Description: Rhs_assc_core Location: 16726-16858 bp Feature: gene Location: 17434-18195 bp Feature: gene Location: 18183-19598 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 18408-18798 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 18408-18798 bp Feature: gene Location: 19681-19821 bp Feature: gene Location: 19906-20859 bp Feature: domain Description: xerC Location: 19936-20833 bp Feature: domain Description: xerC Location: 1993 6-2083 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rhs_assc_core (TIGR03696), RVT-UG7, xerC (PRK01287)

Seq: AUTM01000144.1 (7148 bp)
Overview 1 RT 1: 72-3001 bp Neighborhood of RT #1 [72, 3001] RVT-GII GIIM PiuB Feature: gene Location: 72-1427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-990 bp Feature: domain Description: GIIM Note: maturase Location: 1029-1248 bp Feature: domain Description: GIIM Note: maturase Location: 1029-124 8 bp Feature: gene Location: 1867-2823 bp Feature: domain Description: PiuB Location: 2014-2788 bp Feature: domain Description: PiuB Location: 2014 -2788 bp Feature: gene Location: 2831-3001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PiuB (COG3182)

Seq: AUTM01000251.1 (3150 bp)
Overview 1 RT 1: 174-2754 bp Neighborhood of RT #1 [174, 2777] RVT-GII GIIM PHA02517 Feature: gene Location: 174-1697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1179 bp Feature: domain Description: GIIM Note: maturase Location: 1251-1452 bp Feature: domain Description: GIIM Note: maturase Location: 125 1-145 2 bp Feature: gene Location: 2113-2268 bp Feature: gene Location: 2337-2777 bp Feature: domain Description: PHA02517 Location: 2400-2754 bp Feature: domain Description: PHA025 17 Location: 2400-275 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: AUTM01000150.1 (3876 bp)
Overview 1 RT 1: 1555-3613 bp Neighborhood of RT #1 [1555, 3783] HTH_Tnp_1 HTH_Tnp_1 HTH_32 PHA02517 RVT-GII GIIM Feature: gene Location: 1555-2061 bp Feature: domain Description: HTH_Tnp_1 Location: 1561-1726 bp Feature: domain Description: HTH_Tnp_1 Location: 156 1-1726 bp Feature: domain Description: HTH_Tnp_1 Location: 1750-1972 bp Feature: domain Description: HTH_Tnp_1 Location: 1750-1972 bp Feature: gene Location: 2085-3101 bp Feature: domain Description: HTH_32 Location: 2166-2382 bp Feature: domain Description: HTH_32 Location: 216 6 -2382 bp Feature: domain Description: PHA02517 Location: 2406-2940 bp Feature: domain Description: PHA02517 Location: 2406 -2940 bp Feature: gene Location: 3127-3783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3142-3337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3142-3337 bp Feature: domain Description: GIIM Note: maturase Location: 3394-3613 bp Feature: domain Description: GIIM Note: maturase Location: 3394-36 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), HTH_32 (pfam13565), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AUTM01000216.1 (17290 bp)
Overview 1 RT 1: 8788-11581 bp Neighborhood of RT #1 [8788, 11581] RVT-Retrons Feature: gene Location: 8788-8946 bp Feature: gene Location: 9060-9239 bp Feature: gene Location: 9260-10234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9443-9977 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9443-997 7 bp Feature: gene Location: 10283-10492 bp Feature: gene Location: 10769-11581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons