myRT

myRT report for GCA_000498075.1_TAB23

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Seq: AUTP01000041.1 (1994 bp)
Overview 1 RT 1: 2-1784 bp Neighborhood of RT #1 [2, 1813] RVT-DGRs Avd_like Feature: gene Location: 2-229 bp Feature: gene Location: 234-1133 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 309-933 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 309-933 bp Feature: gene Location: 1135-1332 bp Feature: gene Location: 1496-1813 bp Feature: domain Description: Avd_like Location: 1502-1784 bp Feature: domain Description: Avd_like Location: 1 502-1 784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: AUTP01000276.1 (117645 bp)
Overview 1 RT 1: 103645-106438 bp 2 RT 2: 108765-111583 bp Neighborhood of RT #1 [103645, 106438] RVT-Retrons Neighborhood of RT #2 [108765, 111654] RVT-GII GIIM CybB DDE_Tnp_Tn3 Feature: gene Location: 103645-103803 bp Feature: gene Location: 103917-104096 bp Feature: gene Location: 104117-105091 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 104300-104834 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 104300-104834 bp Feature: gene Location: 105140-105349 bp Feature: gene Location: 105626-106438 bp Feature: gene Location: 108765-109076 bp Feature: gene Location: 109209-109550 bp Feature: gene Location: 109637-110443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109688-110006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109688-110006 bp Feature: domain Description: GIIM Note: maturase Location: 110045-110264 bp Feature: domain Description: GIIM Note: maturase Location: 110045-1102 64 bp Feature: gene Location: 110443-110748 bp Feature: domain Description: CybB Location: 110455-110746 bp Feature: domain Description: CybB Location: 110455-110746 bp Feature: gene Location: 110809-111654 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 110818-111583 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 110818-111583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, RVT-GII, GIIM (pfam08388), CybB (COG3038), DDE_Tnp_Tn3 (pfam01526)

Seq: AUTP01000344.1 (64404 bp)
Overview 1 RT 1: 43274-47508 bp Neighborhood of RT #1 [43274, 47508] PRK15087 RVT-UG12 Feature: gene Location: 43274-43852 bp Feature: domain Description: PRK15087 Location: 43340-43841 bp Feature: domain Description: PRK15087 Location: 43 3 40-43 841 bp Feature: gene Location: 44245-45069 bp Feature: gene Location: 45164-46774 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 45533-45956 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 4553 3 -45956 bp Feature: gene Location: 46869-47207 bp Feature: gene Location: 47218-47508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15087 (hemolysin; Provisional), RVT-UG12