myRT

myRT report for GCA_000498875.2_LAU-EC5

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Seq: AYOG01000008.1 Escherichia coli LAU-EC5 contig_8, whole genome shotgun sequence (163241 bp)
Overview 1 RT 1: 28990-35233 bp Neighborhood of RT #1 [28990, 35370] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 28990-29256 bp Feature: domain Description: Phage_integrase Location: 29056-29152 bp Feature: domain Description: Phage_integrase Location: 29056-291 52 bp Feature: gene Location: 29339-29809 bp Feature: gene Location: 30156-33365 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30684-31173 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30684-31 1 73 bp Feature: domain Description: nitrilase Location: 32679-33276 bp Feature: domain Description: nitrilase Location: 32679-33276 bp Feature: gene Location: 33660-34463 bp Feature: domain Description: AbiEi_3_N Location: 33693-33954 bp Feature: domain Description: AbiEi_3_N Location: 33693-33954 bp Feature: domain Description: AbiEi_3 Location: 33966-34422 bp Feature: domain Description: AbiEi_3 Location: 33966-34422 bp Feature: gene Location: 34450-35370 bp Feature: domain Description: AbiEii Location: 34492-35233 bp Feature: domain Description: AbiEii Location: 34492-35233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: AYOG01000036.1 Escherichia coli LAU-EC5 contig_36, whole genome shotgun sequence (47727 bp)
Overview 1 RT 1: 24388-28679 bp Neighborhood of RT #1 [24388, 28679] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 24388-25650 bp Feature: domain Description: YesM Location: 24901-25642 bp Feature: domain Description: YesM Location: 2 4901-2 5642 bp Feature: gene Location: 25680-25850 bp Feature: gene Location: 26200-26721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26206-26488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 06-2 6488 bp Feature: domain Description: GIIM Note: maturase Location: 26536-26716 bp Feature: domain Description: GIIM Note: maturase Location: 2 6536-2 6716 bp Feature: gene Location: 26749-27288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27079-27157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7079-2 7157 bp Feature: gene Location: 27319-27516 bp Feature: gene Location: 27774-28679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: AYOG01000060.1 Escherichia coli LAU-EC5 contig_60, whole genome shotgun sequence (12179 bp)
Overview 1 RT 1: 9168-12113 bp Neighborhood of RT #1 [9168, 12178] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 9168-9332 bp Feature: domain Description: PHA02517 Location: 9171-9261 bp Feature: domain Description: PHA02517 Location: 9171-9261 bp Feature: gene Location: 9497-9724 bp Feature: gene Location: 9749-11272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10022-10754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10022-10754 bp Feature: domain Description: GIIM Note: maturase Location: 10829-11027 bp Feature: domain Description: GIIM Note: maturase Location: 10829-11027 bp Feature: gene Location: 11864-12178 bp Feature: domain Description: PHA02517 Location: 11867-12113 bp Feature: domain Description: PHA02517 Location: 11867-12113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AYOG01000067.1 Escherichia coli LAU-EC5 contig_67, whole genome shotgun sequence (6853 bp)
Overview 1 RT 1: 1851-4519 bp Neighborhood of RT #1 [1851, 4519] ParE_toxin RVT-GII Feature: gene Location: 1851-2018 bp Feature: gene Location: 2144-2347 bp Feature: domain Description: ParE_toxin Location: 2159-2342 bp Feature: domain Description: ParE_toxin Location: 2159-234 2 bp Feature: gene Location: 2598-4013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2883-3570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2883-3570 bp Feature: gene Location: 4024-4296 bp Feature: gene Location: 4346-4519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), RVT-GII