myRT

myRT report for GCA_000499085.1_RRH_AFF

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Seq: AXUU01000081.1 (1513 bp)
Overview 1 RT 1: 102-1414 bp Neighborhood of RT #1 [102, 1458] RVT-GII DDE_Tnp_1 Feature: gene Location: 102-314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105-306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 05-306 bp Feature: gene Location: 324-752 bp Feature: gene Location: 766-1458 bp Feature: domain Description: DDE_Tnp_1 Location: 772-1414 bp Feature: domain Description: DDE_Tnp_1 Location: 772-1 41 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1 (pfam01609)

Seq: AXUU01000533.1 (1774 bp)
Overview 1 RT 1: 26-1657 bp Neighborhood of RT #1 [26, 1657] RVT-GII GIIM Feature: gene Location: 26-1258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 7-881 bp Feature: domain Description: GIIM Note: maturase Location: 959-1181 bp Feature: domain Description: GIIM Note: maturase Location: 959-1181 bp Feature: gene Location: 1253-1657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AXUU01000167.1 (43282 bp)
Overview 1 RT 1: 35628-38732 bp Neighborhood of RT #1 [35628, 38737] dut slmA RVT-Retrons pyrE Feature: gene Location: 35628-36086 bp Feature: domain Description: dut Location: 35634-36081 bp Feature: domain Description: dut Location: 3 563 4-3 6081 bp Feature: gene Location: 36193-36789 bp Feature: domain Description: slmA Location: 36199-36775 bp Feature: domain Description: slmA Location: 3 6199-3 6775 bp Feature: gene Location: 37118-37627 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37124-37619 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 7124-3 7619 bp Feature: gene Location: 37670-37948 bp Feature: gene Location: 38081-38737 bp Feature: domain Description: pyrE Location: 38099-38732 bp Feature: domain Description: pyrE Location: 3 8099-3 873 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336)

Seq: AXUU01000761.1 (145868 bp)
Overview 1 RT 1: 14397-17050 bp Neighborhood of RT #1 [14397, 17050] COG3547 RVT-GII GIIM Feature: gene Location: 14397-14882 bp Feature: domain Description: COG3547 Location: 14415-14868 bp Feature: domain Description: COG354 7 Location: 14 4 15-14 868 bp Feature: gene Location: 14978-15145 bp Feature: gene Location: 15171-16403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15372-16026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15372-16026 bp Feature: domain Description: GIIM Note: maturase Location: 16104-16326 bp Feature: domain Description: GIIM Note: maturase Location: 16104 -16326 bp Feature: gene Location: 16398-16802 bp Feature: gene Location: 16856-17050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)