myRT

myRT report for GCA_000500125.1_W1046

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Seq: AVAP01000010.1 (11005 bp)
Overview 1 RT 1: 8851-11004 bp Neighborhood of RT #1 [8851, 11003] DUF5338 RVT-UG5 Feature: gene Location: 8851-9171 bp Feature: gene Location: 9450-9800 bp Feature: domain Description: DUF5338 Location: 9459-9666 bp Feature: domain Description: DUF5338 Location: 9459-9666 bp Feature: gene Location: 10119-11003 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 10629-11004 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 0629-1 1 004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5

Seq: AVAP01000011.1 (5759 bp)
Overview 1 RT 1: 20-3791 bp Neighborhood of RT #1 [20, 3865] RVT-UG5 nitrilase Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 20-1138 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 26-179 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 6-179 bp Feature: gene Location: 1266-2231 bp Feature: domain Description: nitrilase Location: 1587-2148 bp Feature: domain Description: nitrilase Location: 1587-2 148 bp Feature: gene Location: 2603-3865 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2654-2906 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 654-2 906 bp Feature: domain Description: INT_P4_C Location: 3260-3791 bp Feature: domain Description: INT_P4_C Location: 32 60-3791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)

Seq: AVAP01000419.1 (9537 bp)
Overview 1 RT 1: 64-3773 bp Neighborhood of RT #1 [64, 3787] RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 64-438 bp Feature: domain Description: RVT_N Location: 121-364 bp Feature: domain Description: RVT_N Location: 121-3 64 bp Feature: gene Location: 464-1582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-103 1 bp Feature: domain Description: GIIM Note: maturase Location: 1082-1316 bp Feature: domain Description: GIIM Note: maturase Location: 1082-13 16 bp Feature: gene Location: 1653-3104 bp Feature: domain Description: Tnp_DNA_bind Location: 1692-1860 bp Feature: domain Description: Tnp_DNA_bind Location: 1692-1860 bp Feature: domain Description: DDE_Tnp_1 Location: 2517-2811 bp Feature: domain Description: DDE_Tnp_1 Location: 2517-2811 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2817-3096 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2817-3 096 bp Feature: gene Location: 3410-3787 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 3437-3773 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 3 43 7-3 773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)