myRT

myRT report for GCA_000500465.1_VIP4-0443

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Seq: AXNP01000570.1 (6851 bp)
Overview 1 RT 1: 1436-6673 bp Neighborhood of RT #1 [1436, 6693] AlpA RVT-UG8 RVT-UG3 PRK09692 Feature: gene Location: 1436-1666 bp Feature: domain Description: AlpA Location: 1451-1613 bp Feature: domain Description: AlpA Location: 1 451 -1 61 3 bp Feature: gene Location: 1666-2433 bp Feature: gene Location: 3140-4936 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3635-4076 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3635-4076 bp Feature: gene Location: 5035-5262 bp Feature: gene Location: 5283-5441 bp Feature: gene Location: 5468-6109 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5756-6101 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5756-61 01 bp Feature: gene Location: 6415-6693 bp Feature: domain Description: PRK09692 Location: 6418-6673 bp Feature: domain Description: PRK09692 Location: 641 8-6673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional)

Seq: AXNP01000605.1 (14132 bp)
Overview 1 RT 1: 4175-10793 bp Neighborhood of RT #1 [4175, 11080] PRK11107 PleD RVT_N RVT-GII GIIM recomb_XerD XerC Phage_int_SAM_4 Feature: gene Location: 4175-6427 bp Feature: domain Description: PRK11107 Location: 4181-6140 bp Feature: domain Description: PRK11107 Location: 4181-6140 bp Feature: gene Location: 6408-7346 bp Feature: domain Description: PleD Location: 6438-7326 bp Feature: domain Description: PleD Location: 6438-732 6 bp Feature: gene Location: 8070-9584 bp Feature: domain Description: RVT_N Location: 8160-8403 bp Feature: domain Description: RVT_N Location: 8160-8403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8448-9075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8448-9075 bp Feature: domain Description: GIIM Note: maturase Location: 9132-9360 bp Feature: domain Description: GIIM Note: maturase Location: 9132 -9360 bp Feature: gene Location: 9720-10448 bp Feature: domain Description: recomb_XerD Location: 9741-10098 bp Feature: domain Description: recomb_XerD Location: 9741-10098 bp Feature: domain Description: XerC Location: 10149-10260 bp Feature: domain Description: XerC Location: 10149-102 60 bp Feature: gene Location: 10484-11080 bp Feature: domain Description: Phage_int_SAM_4 Location: 10619-10793 bp Feature: domain Description: Phage_int_SAM_4 Location: 10619-10793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11107 (hybrid sensory histidine kinase BarA; Provisional), PleD (COG3706), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), recomb_XerD (TIGR02225), XerC (COG4973), Phage_int_SAM_4 (pfam13495)