myRT

myRT report for GCA_000503575.1_Ecoli27A

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Seq: AYQZ01000141.1 (3305 bp)
Overview 1 RT 1: 748-3013 bp Neighborhood of RT #1 [748, 3042] RVT-UG17 SLATT_5 Feature: gene Location: 748-885 bp Feature: gene Location: 901-1035 bp Feature: gene Location: 1143-2513 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1371-1977 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 371 -1 977 bp Feature: gene Location: 2491-3042 bp Feature: domain Description: SLATT_5 Location: 2497-3013 bp Feature: domain Description: SLATT_5 Location: 2497-301 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: AYQZ01000035.1 (41577 bp)
Overview 1 RT 1: 36492-40373 bp Neighborhood of RT #1 [36492, 40378] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 36492-37208 bp Feature: domain Description: rph Location: 36495-37203 bp Feature: domain Description: rph Location: 36495-372 03 bp Feature: gene Location: 37273-37914 bp Feature: domain Description: pyrE Location: 37276-37909 bp Feature: domain Description: pyrE Location: 372 76-37909 bp Feature: gene Location: 38212-39171 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38347-38896 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38347-38896 bp Feature: gene Location: 39217-39813 bp Feature: domain Description: slmA Location: 39223-39799 bp Feature: domain Description: slmA Location: 392 2 3-39799 bp Feature: gene Location: 39920-40378 bp Feature: domain Description: dut Location: 39926-40373 bp Feature: domain Description: dut Location: 3992 6-40373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: AYQZ01000158.1 (2486 bp)
Overview 1 RT 1: 155-1961 bp Neighborhood of RT #1 [155, 2056] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 155-2056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-1253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-1253 bp Feature: domain Description: Intron_maturas2 Location: 1367-1625 bp Feature: domain Description: Intron_maturas2 Location: 13 67-1625 bp Feature: domain Description: HNHc Note: nucleases Location: 1799-1961 bp Feature: domain Description: HNHc Note: nucleases Location: 1799-1961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)