myRT

myRT report for GCA_000503735.2_CcI6

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Seq: AYTZ01000107.1 (3671 bp)
Overview 1 RT 1: 1581-3666 bp Neighborhood of RT #1 [1581, 3668] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 1581-2099 bp Feature: gene Location: 2109-2483 bp Feature: gene Location: 2488-3078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2494-2629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2494-2629 bp Feature: domain Description: GIIM Note: maturase Location: 2698-2923 bp Feature: domain Description: GIIM Note: maturase Location: 2698-2923 bp Feature: gene Location: 3504-3668 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 3558-3666 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 3558-3666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)

Seq: AYTZ01000029.1 (73177 bp)
Overview 1 RT 1: 10899-16699 bp Neighborhood of RT #1 [10899, 16701] Methyltransf_19 FldA RVT-GII GIIM HTH_ARSR PRK07819 PRK07819 Feature: gene Location: 10899-11723 bp Feature: domain Description: Methyltransf_19 Location: 10932-11715 bp Feature: domain Description: Methyltransf_19 Location: 10932 -11715 bp Feature: gene Location: 11918-12772 bp Feature: domain Description: FldA Location: 12221-12401 bp Feature: domain Description: FldA Location: 12 2 2 1-12 401 bp Feature: gene Location: 12857-13504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12860-13124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 860-1312 4 bp Feature: domain Description: GIIM Note: maturase Location: 13205-13409 bp Feature: domain Description: GIIM Note: maturase Location: 132 05-13409 bp Feature: gene Location: 14574-14918 bp Feature: domain Description: HTH_ARSR Location: 14589-14802 bp Feature: domain Description: HTH_ARSR Location: 14589-14802 bp Feature: gene Location: 14923-16701 bp Feature: domain Description: PRK07819 Location: 14947-15781 bp Feature: domain Description: PRK07819 Location: 14947-15781 bp Feature: domain Description: PRK07819 Location: 15862-16699 bp Feature: domain Description: PRK07819 Location: 15862 -16699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_19 (pfam04672), FldA (COG0716), RVT-GII, GIIM (pfam08388), HTH_ARSR (smart00418), PRK07819 (3-hydroxybutyryl-CoA dehydrogenase; Validated)

Seq: AYTZ01000078.1 (12800 bp)
Overview 1 RT 1: 2-1826 bp Neighborhood of RT #1 [2, 1831] RVT-GII GIIM TIGR03252 YoeB_toxin Feature: gene Location: 2-241 bp Feature: gene Location: 295-846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 01-469 bp Feature: domain Description: GIIM Note: maturase Location: 556-763 bp Feature: domain Description: GIIM Note: maturase Location: 556-763 bp Feature: gene Location: 986-1126 bp Feature: domain Description: TIGR03252 Location: 998-1088 bp Feature: domain Description: TIGR03 252 Location: 998-1088 bp Feature: gene Location: 1571-1831 bp Feature: domain Description: YoeB_toxin Location: 1586-1826 bp Feature: domain Description: YoeB_toxin Location: 1586-1826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TIGR03252 (uncharacterized HhH-GPD family protein), YoeB_toxin (pfam06769)

Seq: AYTZ01000055.1 (30485 bp)
Overview 1 RT 1: 1695-7410 bp Neighborhood of RT #1 [1695, 7511] SnoaL_2 MFS_LmrB_MDR_like RVT-GII PinE Zn_ribbon_recom HTH_17 excise HTH_17 Feature: gene Location: 1695-2162 bp Feature: domain Description: SnoaL_2 Location: 1746-2076 bp Feature: domain Description: SnoaL_2 Location: 174 6-2076 bp Feature: gene Location: 2268-3743 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 2355-3675 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 2355-3675 bp Feature: gene Location: 4395-4607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4554-4602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 554 -4 602 bp Feature: gene Location: 4801-4995 bp Feature: gene Location: 5022-7511 bp Feature: domain Description: PinE Location: 5070-5661 bp Feature: domain Description: PinE Location: 5070-5661 bp Feature: domain Description: Zn_ribbon_recom Location: 6009-6174 bp Feature: domain Description: Zn_ribbon_recom Location: 6009-6174 bp Feature: domain Description: HTH_17 Location: 6867-6978 bp Feature: domain Description: HTH_17 Location: 6867-6978 bp Feature: domain Description: excise Location: 7083-7170 bp Feature: domain Description: excise Location: 7083-7170 bp Feature: domain Description: HTH_17 Location: 7311-7410 bp Feature: domain Description: HTH_17 Location: 7311-74 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_2 (pfam12680), MFS_LmrB_MDR_like (cd17503), RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), excise (TIGR01764)

Seq: AYTZ01000033.1 (66360 bp)
Overview 1 RT 1: 33212-38663 bp Neighborhood of RT #1 [33212, 38689] RVT-GII GIIM PIN_MtVapC27-VapC40_like KOG2565 Feature: gene Location: 33212-33586 bp Feature: gene Location: 33583-34716 bp Feature: gene Location: 35485-36861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35800-36430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 800-36430 bp Feature: domain Description: GIIM Note: maturase Location: 36517-36721 bp Feature: domain Description: GIIM Note: maturase Location: 365 17-36721 bp Feature: gene Location: 37030-37242 bp Feature: domain Description: PIN_MtVapC27-VapC40_like Location: 37102-37225 bp Feature: domain Description: PIN_MtVapC27-VapC40_like Location: 37102-37225 bp Feature: gene Location: 37430-38689 bp Feature: domain Description: KOG2565 Location: 37487-38663 bp Feature: domain Description: KOG25 65 Location: 37487-38663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PIN_MtVapC27-VapC40_like (cd18681), KOG2565 (KOG2565, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) )

Seq: AYTZ01000124.1 (1889 bp)
Overview 1 RT 1: 519-1796 bp Neighborhood of RT #1 [519, 1888] RVT-GII YhhI Feature: gene Location: 519-1601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 723-1413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 723-1413 bp Feature: gene Location: 1676-1888 bp Feature: domain Description: YhhI Location: 1679-1796 bp Feature: domain Description: YhhI Location: 16 79-1796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YhhI (COG5433)