myRT

myRT report for GCA_000506485.2_WGS_Escherichia_coli_EC9

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Seq: AYNI01000029.1 (82033 bp)
Overview 1 RT 1: 36346-40228 bp Neighborhood of RT #1 [36346, 40233] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 36346-36804 bp Feature: domain Description: dut Location: 36352-36799 bp Feature: domain Description: dut Location: 36352-36799 bp Feature: gene Location: 36911-37507 bp Feature: domain Description: slmA Location: 36917-37493 bp Feature: domain Description: slmA Location: 3691 7-37493 bp Feature: gene Location: 37553-38512 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37688-38237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37688-38237 bp Feature: gene Location: 38810-39466 bp Feature: domain Description: pyrE Location: 38828-39461 bp Feature: domain Description: pyrE Location: 38828-39461 bp Feature: gene Location: 39517-40233 bp Feature: domain Description: rph Location: 39520-40228 bp Feature: domain Description: rph Location: 39520-40228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: AYNI01000041.1 (35289 bp)
Overview 1 RT 1: 4415-8657 bp Neighborhood of RT #1 [4415, 8657] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 4415-4648 bp Feature: domain Description: DUF905 Location: 4445-4643 bp Feature: domain Description: DUF905 Location: 4445-4643 bp Feature: gene Location: 4706-5146 bp Feature: domain Description: PRK13732 Location: 4712-5144 bp Feature: domain Description: PRK13732 Location: 4712 -5144 bp Feature: gene Location: 5341-7242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5608-6439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5608-6439 bp Feature: domain Description: Intron_maturas2 Location: 6553-6811 bp Feature: domain Description: Intron_maturas2 Location: 6553-6811 bp Feature: domain Description: HNHc Note: nucleases Location: 6985-7147 bp Feature: domain Description: HNHc Note: nucleases Location: 6985-7147 bp Feature: gene Location: 7959-8195 bp Feature: gene Location: 8196-8657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: AYNI01000048.1 (22949 bp)
Overview 1 RT 1: 15422-19404 bp Neighborhood of RT #1 [15422, 19430] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 15422-16453 bp Feature: domain Description: Asparaginase_2 Location: 15512-16445 bp Feature: domain Description: Asparaginase_2 Location: 15512-16445 bp Feature: gene Location: 16780-16929 bp Feature: gene Location: 16977-17423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17283-17385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17283 -173 85 bp Feature: gene Location: 17645-18016 bp Feature: gene Location: 18069-19430 bp Feature: domain Description: DcuC Location: 18072-19404 bp Feature: domain Description: DcuC Location: 18072-19404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)