myRT

myRT report for GCA_000506685.1_Spspn.str22725_v1.0

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Seq: AYRO01000029.1 (26107 bp)
Overview 1 RT 1: 2-1476 bp Neighborhood of RT #1 [2, 1511] RVT-GII HTH_29 YneF Feature: gene Location: 2-295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-293 bp Feature: gene Location: 385-1104 bp Feature: domain Description: HTH_29 Location: 430-601 bp Feature: domain Description: HTH_29 Location: 430-601 bp Feature: gene Location: 1260-1511 bp Feature: domain Description: YneF Location: 1266-1476 bp Feature: domain Description: YneF Location: 1 266-1 476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_29 (pfam13551), YneF (COG3763)

Seq: AYRO01000097.1 (441 bp)
Overview 1 RT 1: 3-279 bp Neighborhood of RT #1 [3, 278] RVT-GII Feature: gene Location: 3-278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 07-2 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AYRO01000045.1 (11010 bp)
Overview 1 RT 1: 2-4934 bp Neighborhood of RT #1 [2, 4981] RVT-GII GIIM INT_ICEBs1_C_like rexB_recomb Feature: gene Location: 2-805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-3 47 bp Feature: domain Description: GIIM Note: maturase Location: 401-614 bp Feature: domain Description: GIIM Note: maturase Location: 401-614 bp Feature: gene Location: 889-1137 bp Feature: domain Description: INT_ICEBs1_C_like Location: 907-1072 bp Feature: domain Description: INT_ICEBs1_C_like Location: 907-1072 bp Feature: gene Location: 1682-4981 bp Feature: domain Description: rexB_recomb Location: 1712-4934 bp Feature: domain Description: rexB_recomb Location: 1712-493 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), INT_ICEBs1_C_like (cd01189), rexB_recomb (TIGR02774)

Seq: AYRO01000020.1 (34631 bp)
Overview 1 RT 1: 33145-34450 bp Neighborhood of RT #1 [33145, 34629] YqgV RVT-GII GIIM Feature: gene Location: 33145-33486 bp Feature: domain Description: YqgV Location: 33199-33481 bp Feature: domain Description: YqgV Location: 33199-334 81 bp Feature: gene Location: 33489-33629 bp Feature: gene Location: 33730-34629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33742-34183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3374 2-34 183 bp Feature: domain Description: GIIM Note: maturase Location: 34237-34450 bp Feature: domain Description: GIIM Note: maturase Location: 34 237-34 4 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgV (COG0011), RVT-GII, GIIM (pfam08388)