myRT

myRT report for GCA_000507605.1_Esch_coli_HVH_23_4-6066488_V1

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Seq: KI669319.1 (1351987 bp)
Overview 1 RT 1: 102118-108458 bp Neighborhood of RT #1 [102118, 108466] Psu PRK09678 RVT-UG3 RVT-UG8 PRK09692 PRK10870 Feature: gene Location: 102118-102669 bp Feature: domain Description: Psu Location: 102139-102649 bp Feature: domain Description: Psu Location: 1 021 39-1 02649 bp Feature: gene Location: 102675-102947 bp Feature: domain Description: PRK09678 Location: 102684-102849 bp Feature: domain Description: PRK09678 Location: 1 02684-1 02849 bp Feature: gene Location: 103342-104619 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 103630-104125 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 03630-1 041 25 bp Feature: gene Location: 104610-106628 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 105183-105636 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 051 83-1 05636 bp Feature: gene Location: 107199-107537 bp Feature: domain Description: PRK09692 Location: 107208-107529 bp Feature: domain Description: PRK09692 Location: 1 07208-1 07529 bp Feature: gene Location: 107972-108466 bp Feature: domain Description: PRK10870 Location: 108005-108458 bp Feature: domain Description: PRK1 0870 Location: 1 08005-1 08458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PRK09692 (Integrase; provisional), PRK10870 (transcriptional repressor MprA; Provisional)

Seq: KI669336.1 (118373 bp)
Overview 1 RT 1: 1328-4565 bp Neighborhood of RT #1 [1328, 4630] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1328-1732 bp Feature: domain Description: InsE Location: 1358-1694 bp Feature: domain Description: InsE Location: 1358-1694 bp Feature: gene Location: 1761-2117 bp Feature: domain Description: PHA02517 Location: 1764-2073 bp Feature: domain Description: PHA02 517 Location: 1764-2 073 bp Feature: gene Location: 2234-3757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2507-3239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 507-32 39 bp Feature: domain Description: GIIM Note: maturase Location: 3314-3512 bp Feature: domain Description: GIIM Note: maturase Location: 3314-3512 bp Feature: gene Location: 3711-4136 bp Feature: gene Location: 4349-4630 bp Feature: domain Description: PHA02517 Location: 4355-4565 bp Feature: domain Description: PHA02 517 Location: 4355-4565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)