myRT

myRT report for GCA_000509105.1_ASM50910v1

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Seq: BAIF02000064.1 (28608 bp)
Overview 1 RT 1: 37-3304 bp Neighborhood of RT #1 [37, 3387] RVT-Retrons TnpB_IS66 Feature: gene Location: 37-912 bp Feature: gene Location: 1088-2242 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1244-1814 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 244-1 81 4 bp Feature: gene Location: 2550-2999 bp Feature: gene Location: 3175-3387 bp Feature: domain Description: TnpB_IS66 Location: 3181-3304 bp Feature: domain Description: TnpB_IS66 Location: 31 81 -3304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BAIF02000128.1 (2677 bp)
Overview 1 RT 1: 131-2438 bp Neighborhood of RT #1 [131, 2566] RVT-GII HNHc Feature: gene Location: 131-577 bp Feature: gene Location: 800-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058-1769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058-1769 bp Feature: domain Description: HNHc Note: nucleases Location: 2333-2438 bp Feature: domain Description: HNHc Note: nucleases Location: 2 333-2 438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BAIF02000129.1 (2498 bp)
Overview 1 RT 1: 119-2370 bp Neighborhood of RT #1 [119, 2370] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 119-1921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 86-1202 bp Feature: domain Description: Intron_maturas2 Location: 1337-1577 bp Feature: domain Description: Intron_maturas2 Location: 13 3 7-1577 bp Feature: domain Description: HNHc Note: nucleases Location: 1751-1901 bp Feature: domain Description: HNHc Note: nucleases Location: 1751-1901 bp Feature: gene Location: 2194-2370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BAIF02000023.1 (88422 bp)
Overview 1 RT 1: 4457-7284 bp Neighborhood of RT #1 [4457, 7284] UgpE RVT_N RVT-GII Feature: gene Location: 4457-5347 bp Feature: domain Description: UgpE Location: 4481-5342 bp Feature: domain Description: UgpE Location: 4 4 81-534 2 bp Feature: gene Location: 5481-5639 bp Feature: gene Location: 5803-6276 bp Feature: domain Description: RVT_N Location: 5809-5998 bp Feature: domain Description: RVT_N Location: 5809-5998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6043-6232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604 3-6232 bp Feature: gene Location: 6369-6773 bp Feature: gene Location: 6940-7284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BAIF02000131.1 (1893 bp)
Overview 1 RT 1: 94-1177 bp Neighborhood of RT #1 [94, 1386] RVT-GII GIIM Feature: gene Location: 94-1386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295-913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295 -913 bp Feature: domain Description: GIIM Note: maturase Location: 967-1177 bp Feature: domain Description: GIIM Note: maturase Location: 967-1177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BAIF02000004.1 (95378 bp)
Overview 1 RT 1: 80323-86180 bp Neighborhood of RT #1 [80323, 86368] DUF3801 VirD4 RVT-GII SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Feature: gene Location: 80323-80814 bp Feature: domain Description: DUF3801 Location: 80401-80743 bp Feature: domain Description: DUF3801 Location: 80401-80743 bp Feature: gene Location: 80811-81596 bp Feature: domain Description: VirD4 Location: 81033-81549 bp Feature: domain Description: VirD4 Location: 81033-81549 bp Feature: gene Location: 82230-84137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82563-83307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8256 3-83307 bp Feature: gene Location: 84269-84529 bp Feature: gene Location: 84590-86368 bp Feature: domain Description: SR_TndX_transposase Location: 84614-85022 bp Feature: domain Description: SR_TndX_transposase Location: 846 14-85022 bp Feature: domain Description: Recombinase Location: 85121-85484 bp Feature: domain Description: Recombinase Location: 85121-85484 bp Feature: domain Description: Zn_ribbon_recom Location: 85526-85709 bp Feature: domain Description: Zn_ribbon_recom Location: 85526 -85709 bp Feature: domain Description: DUF4368 Location: 85994-86180 bp Feature: domain Description: DUF436 8 Location: 85994-86 180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BAIF02000073.1 (13102 bp)
Overview 1 RT 1: 1824-5508 bp Neighborhood of RT #1 [1824, 5777] T4SS-DNA_transf RVT-GII TraG-D_C Feature: gene Location: 1824-3095 bp Feature: domain Description: T4SS-DNA_transf Location: 2178-3039 bp Feature: domain Description: T4SS-DNA_transf Location: 217 8-3039 bp Feature: gene Location: 3359-3526 bp Feature: gene Location: 3852-4502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4161-4497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4161-4497 bp Feature: gene Location: 4562-5086 bp Feature: gene Location: 5124-5777 bp Feature: domain Description: TraG-D_C Location: 5199-5508 bp Feature: domain Description: TraG-D_C Location: 5199-5508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BAIF02000044.1 (43607 bp)
Overview 1 RT 1: 38575-43531 bp Neighborhood of RT #1 [38575, 43531] SalY SalY RVT-GII GIIM Feature: gene Location: 38575-41148 bp Feature: domain Description: SalY Location: 38608-39661 bp Feature: domain Description: SalY Location: 38 608 -39661 bp Feature: domain Description: SalY Location: 40735-41095 bp Feature: domain Description: SalY Location: 40735-41095 bp Feature: gene Location: 41601-41729 bp Feature: gene Location: 41739-43079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42024-42717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42024-42717 bp Feature: domain Description: GIIM Note: maturase Location: 42783-43005 bp Feature: domain Description: GIIM Note: maturase Location: 4278 3-43005 bp Feature: gene Location: 43385-43531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT