myRT

myRT report for GCA_000509145.1_ASM50914v1

Download annotations/find similar RTs

Seq: BAIJ02000054.1 (136458 bp)
Overview 1 RT 1: 77494-82054 bp Neighborhood of RT #1 [77494, 82062] Spr RVT-GII Intron_maturas2 HNHc DUF4315 Feature: gene Location: 77494-79146 bp Feature: domain Description: Spr Location: 78853-79129 bp Feature: domain Description: Spr Location: 78853-791 29 bp Feature: gene Location: 79305-79559 bp Feature: gene Location: 79765-81561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80032-80842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80032-80842 bp Feature: domain Description: Intron_maturas2 Location: 80908-81220 bp Feature: domain Description: Intron_maturas2 Location: 80908-81 220 bp Feature: domain Description: HNHc Note: nucleases Location: 81379-81535 bp Feature: domain Description: HNHc Note: nucleases Location: 81 379-81 535 bp Feature: gene Location: 81589-81783 bp Feature: gene Location: 81805-82062 bp Feature: domain Description: DUF4315 Location: 81817-82054 bp Feature: domain Description: DUF431 5 Location: 81 81 7-82054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4315 (pfam14193)

Seq: BAIJ02000216.1 (2535 bp)
Overview 1 RT 1: 118-2290 bp Neighborhood of RT #1 [118, 2290] RVT-GII Intron_maturas2 Feature: gene Location: 118-1929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-1213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382 -12 13 bp Feature: domain Description: Intron_maturas2 Location: 1282-1609 bp Feature: domain Description: Intron_maturas2 Location: 12 82 -1609 bp Feature: gene Location: 1931-2068 bp Feature: gene Location: 2102-2290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: BAIJ02000016.1 (24106 bp)
Overview 1 RT 1: 2-4554 bp Neighborhood of RT #1 [2, 4742] RVT-GII Intron_maturas2 HNHc SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Feature: gene Location: 2-205 bp Feature: gene Location: 316-687 bp Feature: gene Location: 703-2493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979-1786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979-1786 bp Feature: domain Description: Intron_maturas2 Location: 1963-2152 bp Feature: domain Description: Intron_maturas2 Location: 1963 -2152 bp Feature: domain Description: HNHc Note: nucleases Location: 2329-2473 bp Feature: domain Description: HNHc Note: nucleases Location: 23 29-2473 bp Feature: gene Location: 2565-2891 bp Feature: gene Location: 2964-4742 bp Feature: domain Description: SR_TndX_transposase Location: 2988-3396 bp Feature: domain Description: SR_TndX_transposase Location: 2988-3 3 96 bp Feature: domain Description: Recombinase Location: 3495-3858 bp Feature: domain Description: Recombinase Location: 3 495-3 858 bp Feature: domain Description: Zn_ribbon_recom Location: 3900-4083 bp Feature: domain Description: Zn_ribbon_recom Location: 3 900-4083 bp Feature: domain Description: DUF4368 Location: 4368-4554 bp Feature: domain Description: DUF43 68 Location: 43 68-4554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)

Seq: BAIJ02000157.1 (140232 bp)
Overview 1 RT 1: 440-3046 bp Neighborhood of RT #1 [440, 3046] RVT-UG2 Feature: gene Location: 440-1786 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 638-1475 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 638-14 75 bp Feature: gene Location: 2362-2502 bp Feature: gene Location: 2522-3046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: BAIJ02000218.1 (2426 bp)
Overview 1 RT 1: 121-2365 bp Neighborhood of RT #1 [121, 2365] RVT-GII Intron_maturas2 Feature: gene Location: 121-1911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388-1201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388-1201 bp Feature: domain Description: Intron_maturas2 Location: 1285-1579 bp Feature: domain Description: Intron_maturas2 Location: 1285 -15 79 bp Feature: gene Location: 2180-2365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: BAIJ02000217.1 (2504 bp)
Overview 1 RT 1: 105-2227 bp Neighborhood of RT #1 [105, 2227] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 105-1922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-1188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36 9-1188 bp Feature: domain Description: Intron_maturas2 Location: 1260-1563 bp Feature: domain Description: Intron_maturas2 Location: 126 0-156 3 bp Feature: domain Description: HNHc Note: nucleases Location: 1743-1887 bp Feature: domain Description: HNHc Note: nucleases Location: 1743-1887 bp Feature: gene Location: 1961-2227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BAIJ02000220.1 (2388 bp)
Overview 1 RT 1: 2-1876 bp Neighborhood of RT #1 [2, 2271] RVT_N RVT-GII GIIM Feature: gene Location: 2-127 bp Feature: gene Location: 214-369 bp Feature: gene Location: 607-2271 bp Feature: domain Description: RVT_N Location: 652-895 bp Feature: domain Description: RVT_N Location: 652-895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 940-1591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 940-1591 bp Feature: domain Description: GIIM Note: maturase Location: 1642-1876 bp Feature: domain Description: GIIM Note: maturase Location: 1642-187 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: BAIJ02000213.1 (2806 bp)
Overview 1 RT 1: 94-1861 bp Neighborhood of RT #1 [94, 2067] RVT-GII HNHc Feature: gene Location: 94-2067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430-1168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430-1168 bp Feature: domain Description: HNHc Note: nucleases Location: 1723-1861 bp Feature: domain Description: HNHc Note: nucleases Location: 1723-18 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: BAIJ02000215.1 (2618 bp)
Overview 1 RT 1: 124-2388 bp Neighborhood of RT #1 [124, 2388] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 124-1914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1207 bp Feature: domain Description: Intron_maturas2 Location: 1384-1576 bp Feature: domain Description: Intron_maturas2 Location: 1384-1576 bp Feature: domain Description: HNHc Note: nucleases Location: 1750-1894 bp Feature: domain Description: HNHc Note: nucleases Location: 1750-189 4 bp Feature: gene Location: 1930-2388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BAIJ02000056.1 (96295 bp)
Overview 1 RT 1: 47117-51955 bp Neighborhood of RT #1 [47117, 51955] BaeS MhpC RVT-GII HTH_XRE Feature: gene Location: 47117-48697 bp Feature: domain Description: BaeS Location: 47924-48689 bp Feature: domain Description: BaeS Location: 47924-48689 bp Feature: gene Location: 48823-50163 bp Feature: domain Description: MhpC Location: 49222-50035 bp Feature: domain Description: MhpC Location: 49222-50035 bp Feature: gene Location: 50393-50611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50402-50579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50402-50579 bp Feature: gene Location: 50795-51091 bp Feature: domain Description: HTH_XRE Location: 50813-50972 bp Feature: domain Description: HTH_XRE Location: 50813-50972 bp Feature: gene Location: 51524-51955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), MhpC (COG0596), RVT-GII, HTH_XRE (smart00530)