myRT

myRT report for GCA_000511565.1_EcoliFCP1

Download annotations/find similar RTs

Seq: AYKE01000025.1 (57680 bp)
Overview 1 RT 1: 49758-57661 bp Neighborhood of RT #1 [49758, 57661] mutS1 INT_Rci_Hp1_C INT_P4_C RVT-UG8 Feature: gene Location: 49758-52340 bp Feature: domain Description: mutS1 Location: 49809-52329 bp Feature: domain Description: mutS1 Location: 49809-52329 bp Feature: gene Location: 52485-53945 bp Feature: domain Description: INT_Rci_Hp1_C Location: 52860-53067 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 52860-53067 bp Feature: domain Description: INT_P4_C Location: 53286-53823 bp Feature: domain Description: INT_P4_C Location: 53286-53823 bp Feature: gene Location: 55201-57219 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 55771-56221 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 55771 -56221 bp Feature: gene Location: 57458-57661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutS1 (TIGR01070), INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), RVT-UG8

Seq: AYKE01000009.1 (148945 bp)
Overview 1 RT 1: 27343-30785 bp Neighborhood of RT #1 [27343, 30850] COG3547 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 27343-27732 bp Feature: domain Description: COG3547 Location: 27409-27670 bp Feature: domain Description: COG3547 Location: 2 7409-2 7670 bp Feature: gene Location: 27891-28337 bp Feature: domain Description: PHA02517 Location: 27894-28335 bp Feature: domain Description: PHA02 517 Location: 2 7894-2 8335 bp Feature: gene Location: 28454-29977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28727-29459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 872 7-2 9459 bp Feature: domain Description: GIIM Note: maturase Location: 29534-29732 bp Feature: domain Description: GIIM Note: maturase Location: 2 9534-2 9732 bp Feature: gene Location: 29931-30356 bp Feature: gene Location: 30569-30850 bp Feature: domain Description: PHA02517 Location: 30575-30785 bp Feature: domain Description: PHA02 517 Location: 30575-30785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)