myRT

myRT report for GCA_000514775.1_ASM51477v1

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Seq: AZWO01000029.1 Salinispora pacifica CNR114 B118DRAFT_scaffold_26.27_C, whole genome shotgun sequence (72643 bp)
Overview 1 RT 1: 68318-72531 bp Neighborhood of RT #1 [68318, 72641] DUF2236 RVT-GII GIIM DDE_Tnp_ISL3 Feature: gene Location: 68318-69244 bp Feature: domain Description: DUF2236 Location: 68477-69050 bp Feature: domain Description: DUF2236 Location: 68477-69050 bp Feature: gene Location: 69241-70125 bp Feature: gene Location: 70145-71626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70496-71192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70496-71 1 92 bp Feature: domain Description: GIIM Note: maturase Location: 71261-71477 bp Feature: domain Description: GIIM Note: maturase Location: 71 261 -71 477 bp Feature: gene Location: 71751-72641 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 72258-72531 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 72258-72531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2236 (pfam09995), RVT-GII, GIIM (pfam08388), DDE_Tnp_ISL3 (pfam01610)

Seq: AZWO01000048.1 Salinispora pacifica CNR114 B118DRAFT_scaffold_45.46_C, whole genome shotgun sequence (31773 bp)
Overview 1 RT 1: 24566-31770 bp Neighborhood of RT #1 [24566, 31770] FAAL PRK06241 RVT-GII Feature: gene Location: 24566-26251 bp Feature: domain Description: FAAL Location: 24632-26201 bp Feature: domain Description: FAAL Location: 2 4632 -2 62 01 bp Feature: gene Location: 26248-28860 bp Feature: domain Description: PRK06241 Location: 26251-28837 bp Feature: domain Description: PRK062 41 Location: 2 62 51-2 8837 bp Feature: gene Location: 30123-30260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30177-30258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30177-302 58 bp Feature: gene Location: 30311-30865 bp Feature: gene Location: 30928-31770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FAAL (cd05931), PRK06241 (phosphoenolpyruvate synthase; Validated), RVT-GII

Seq: AZWO01000049.1 Salinispora pacifica CNR114 B118DRAFT_scaffold_46.47_C, whole genome shotgun sequence (31667 bp)
Overview 1 RT 1: 29183-31665 bp Neighborhood of RT #1 [29183, 31665] PhdYeFM_antitox RelE RVT-GII RVT-GII Feature: gene Location: 29183-29437 bp Feature: domain Description: PhdYeFM_antitox Location: 29189-29336 bp Feature: domain Description: PhdYeFM_antitox Location: 29189-293 3 6 bp Feature: gene Location: 29434-29676 bp Feature: domain Description: RelE Location: 29440-29671 bp Feature: domain Description: RelE Location: 29440-29671 bp Feature: gene Location: 30265-30660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30280-30358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 0280-3 03 58 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30442-30610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 0442-3 0610 bp Feature: gene Location: 31357-31665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), RelE (pfam06296), RVT-GII