myRT

myRT report for GCA_000514975.1_ASM51497v1

Download annotations/find similar RTs

Seq: AZWY01000043.1 (32219 bp)
Overview 1 RT 1: 338-3597 bp Neighborhood of RT #1 [338, 3620] RVT-GII Intron_maturas2 HNHc DDE_Tnp_1_4 Feature: gene Location: 338-2335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 821-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 821 -1 61 6 bp Feature: domain Description: Intron_maturas2 Location: 1718-1949 bp Feature: domain Description: Intron_maturas2 Location: 1 71 8-1 949 bp Feature: domain Description: HNHc Note: nucleases Location: 2132-2300 bp Feature: domain Description: HNHc Note: nucleases Location: 21 32-2300 bp Feature: gene Location: 2935-3072 bp Feature: gene Location: 3156-3620 bp Feature: domain Description: DDE_Tnp_1_4 Location: 3231-3597 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 3231 -3597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DDE_Tnp_1_4 (pfam13701)

Seq: AZWY01000028.1 (70808 bp)
Overview 1 RT 1: 65784-70214 bp Neighborhood of RT #1 [65784, 70249] PRK07773 DUF3987 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 65784-67739 bp Feature: domain Description: PRK07773 Location: 65793-66195 bp Feature: domain Description: PRK07773 Location: 65793-66195 bp Feature: domain Description: DUF3987 Location: 66342-67431 bp Feature: domain Description: DUF3987 Location: 66342 -67431 bp Feature: gene Location: 68035-68301 bp Feature: gene Location: 68474-70249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68735-69530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68735-69530 bp Feature: domain Description: Intron_maturas2 Location: 69632-69863 bp Feature: domain Description: Intron_maturas2 Location: 69632 -69863 bp Feature: domain Description: HNHc Note: nucleases Location: 70046-70214 bp Feature: domain Description: HNHc Note: nucleases Location: 70046-702 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07773 (replicative DNA helicase; Validated), DUF3987 (pfam13148), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: AZWY01000033.1 (54697 bp)
Overview 1 RT 1: 49364-54532 bp Neighborhood of RT #1 [49364, 54567] COG5659 COG5659 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 49364-49618 bp Feature: gene Location: 51311-52207 bp Feature: domain Description: COG5659 Location: 51320-51608 bp Feature: domain Description: COG5659 Location: 513 20-51608 bp Feature: domain Description: COG5659 Location: 51779-52010 bp Feature: domain Description: COG5659 Location: 51779-52010 bp Feature: gene Location: 52792-54567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53053-53848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 053 -53 848 bp Feature: domain Description: Intron_maturas2 Location: 53950-54181 bp Feature: domain Description: Intron_maturas2 Location: 53 950-54181 bp Feature: domain Description: HNHc Note: nucleases Location: 54364-54532 bp Feature: domain Description: HNHc Note: nucleases Location: 543 64-5453 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5659 (SRSO17 transposase ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: AZWY01000047.1 (22803 bp)
Overview 1 RT 1: 18061-22801 bp Neighborhood of RT #1 [18061, 22801] DDE_Tnp_1_6 HTH_Tnp_ISL3 RVT-GII RVT-GII GIIM DDE_Tnp_ISL3 Feature: gene Location: 18061-18396 bp Feature: domain Description: DDE_Tnp_1_6 Location: 18103-18286 bp Feature: domain Description: DDE_Tnp_1_6 Location: 18103-18286 bp Feature: gene Location: 18753-19160 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 18831-18984 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 18831-18984 bp Feature: gene Location: 19716-20582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20061-20505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20061-20505 bp Feature: gene Location: 20619-21176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20625-20757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20625-20757 bp Feature: domain Description: GIIM Note: maturase Location: 20829-21051 bp Feature: domain Description: GIIM Note: maturase Location: 20829-21051 bp Feature: gene Location: 21361-22047 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 21367-21997 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 21367-21997 bp Feature: gene Location: 22574-22801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_6 (pfam13751), HTH_Tnp_ISL3 (pfam13542), RVT-GII, GIIM (pfam08388), DDE_Tnp_ISL3 (pfam01610)

Seq: AZWY01000017.1 (195341 bp)
Overview 1 RT 1: 191962-195176 bp Neighborhood of RT #1 [191962, 195211] COG5659 DDE_5 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 191962-192321 bp Feature: domain Description: COG5659 Location: 191971-192130 bp Feature: domain Description: COG5 65 9 Location: 191971-192130 bp Feature: gene Location: 192381-192851 bp Feature: domain Description: DDE_5 Location: 192393-192687 bp Feature: domain Description: DDE_5 Location: 192393-192687 bp Feature: gene Location: 193436-195211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193697-194492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193697-194492 bp Feature: domain Description: Intron_maturas2 Location: 194594-194825 bp Feature: domain Description: Intron_maturas2 Location: 1945 94-194825 bp Feature: domain Description: HNHc Note: nucleases Location: 195008-195176 bp Feature: domain Description: HNHc Note: nucleases Location: 195 008-195 176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5659 (SRSO17 transposase ), DDE_5 (pfam13546), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)