myRT

myRT report for GCA_000516475.1_Candidatus_Magnetoglobus_multicellularis

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Seq: ATBP01002789.1 (1005 bp)
Overview 1 RT 1: 1-938 bp Neighborhood of RT #1 [1, 938] RVT-GII Feature: gene Location: 1-426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34-418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34-41 8 bp Feature: gene Location: 588-938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ATBP01000036.1 (22895 bp)
Overview 1 RT 1: 1-2680 bp Neighborhood of RT #1 [1, 2680] RVT-CRISPR Cas1_I-II-III Feature: gene Location: 1-849 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 250-823 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 50-82 3 bp Feature: gene Location: 884-1957 bp Feature: domain Description: Cas1_I-II-III Location: 947-1889 bp Feature: domain Description: Cas1_I-II-III Location: 947-1889 bp Feature: gene Location: 2102-2680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: ATBP01000769.1 (4344 bp)
Overview 1 RT 1: 65-4302 bp Neighborhood of RT #1 [65, 4343] Cas1_I-II-III RVT-CRISPR TPR KOG0553 COG4951 Cas2_I_II_III Feature: gene Location: 65-1009 bp Feature: domain Description: Cas1_I-II-III Location: 71-971 bp Feature: domain Description: Cas1_I-II-III Location: 71-971 bp Feature: gene Location: 1063-1977 bp Feature: gene Location: 1996-4050 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2191-2800 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2191-2800 bp Feature: domain Description: TPR Location: 2959-3178 bp Feature: domain Description: TPR Location: 2959-3 178 bp Feature: domain Description: KOG0553 Location: 3250-3406 bp Feature: domain Description: KOG0553 Location: 3 250-3 406 bp Feature: domain Description: COG4951 Location: 3562-3679 bp Feature: domain Description: COG4951 Location: 3 562-3 679 bp Feature: gene Location: 4047-4343 bp Feature: domain Description: Cas2_I_II_III Location: 4077-4302 bp Feature: domain Description: Cas2_I_II_III Location: 4077-43 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), RVT-CRISPR, TPR (smart00028), KOG0553 (KOG0553, TPR repeat-containing protein ), COG4951 (Uncharacterized protein ), Cas2_I_II_III (cl11442)

Seq: ATBP01002041.1 (1527 bp)
Overview 1 RT 1: 3-1091 bp Neighborhood of RT #1 [3, 1465] HRDC RVT-DGRs Feature: gene Location: 3-296 bp Feature: domain Description: HRDC Location: 6-180 bp Feature: domain Description: HRDC Location: 6-180 bp Feature: gene Location: 293-1465 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 503-1091 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 503-1091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), RVT-DGRs

Seq: ATBP01000692.1 (4768 bp)
Overview 1 RT 1: 3-3605 bp Neighborhood of RT #1 [3, 3605] cas1 RVT-CRISPR Cas_Cas1 Feature: gene Location: 3-353 bp Feature: domain Description: cas1 Location: 54-354 bp Feature: domain Description: cas1 Location: 5 4-35 4 bp Feature: gene Location: 426-2075 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 639-1251 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 639-125 1 bp Feature: domain Description: Cas_Cas1 Location: 1734-2061 bp Feature: domain Description: Cas_Cas1 Location: 1734-2061 bp Feature: gene Location: 2633-3190 bp Feature: gene Location: 3132-3605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas1 (TIGR00287), RVT-CRISPR, Cas_Cas1 (pfam01867)

Seq: ATBP01003506.1 (608 bp)
Overview 1 RT 1: 2-539 bp Neighborhood of RT #1 [2, 607] RVT-CRISPR-like YsdA Feature: gene Location: 2-295 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 209-293 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 209-293 bp Feature: gene Location: 371-607 bp Feature: domain Description: YsdA Location: 377-539 bp Feature: domain Description: YsdA Location: 377-539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, YsdA (COG3326)

Seq: ATBP01002758.1 (1024 bp)
Overview 1 RT 1: 76-982 bp Neighborhood of RT #1 [76, 1023] RVT-GII GIIM HNH Feature: gene Location: 76-1023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 9-319 bp Feature: domain Description: GIIM Note: maturase Location: 373-604 bp Feature: domain Description: GIIM Note: maturase Location: 37 3-604 bp Feature: domain Description: HNH Note: nucleases Location: 844-982 bp Feature: domain Description: HNH Note: nucleases Location: 844-982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: ATBP01001209.1 (2770 bp)
Overview 1 RT 1: 1408-2348 bp Neighborhood of RT #1 [1408, 2377] Cas_Cas1 CRISPR_Cas2 RVT-CRISPR Feature: gene Location: 1408-1773 bp Feature: domain Description: Cas_Cas1 Location: 1429-1765 bp Feature: domain Description: Cas_Cas1 Location: 1429-1765 bp Feature: gene Location: 1789-2154 bp Feature: domain Description: CRISPR_Cas2 Location: 1807-2005 bp Feature: domain Description: CRISPR_Cas2 Location: 18 07-2005 bp Feature: gene Location: 2168-2377 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2171-2348 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2171-2348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas1 (pfam01867), CRISPR_Cas2 (pfam09827), RVT-CRISPR

Seq: ATBP01001995.1 (1576 bp)
Overview 1 RT 1: 73-1431 bp Neighborhood of RT #1 [73, 1511] RVT_N RVT-GII Feature: gene Location: 73-237 bp Feature: gene Location: 711-1511 bp Feature: domain Description: RVT_N Location: 765-1008 bp Feature: domain Description: RVT_N Location: 765-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053-1431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053-1431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: ATBP01000990.1 (3401 bp)
Overview 1 RT 1: 48-2901 bp Neighborhood of RT #1 [48, 2906] RVT-DGRs TIR_2 COG1373 Feature: gene Location: 48-701 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 141-420 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 141-420 bp Feature: gene Location: 906-1418 bp Feature: domain Description: TIR_2 Location: 915-1260 bp Feature: domain Description: TIR_2 Location: 915-1260 bp Feature: gene Location: 1629-2906 bp Feature: domain Description: COG1373 Location: 1725-2901 bp Feature: domain Description: COG1373 Location: 1725-2901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, TIR_2 (pfam13676), COG1373 (Predicted ATPase, AAA+ superfamily )

Seq: ATBP01001350.1 (2473 bp)
Overview 1 RT 1: 334-2398 bp Neighborhood of RT #1 [334, 2398] RVT-DGRs Feature: gene Location: 334-1608 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 523-1207 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 523-1207 bp Feature: gene Location: 2003-2398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: ATBP01001316.1 (2518 bp)
Overview 1 RT 1: 453-1704 bp Neighborhood of RT #1 [453, 1778] RVT-GII GIIM Feature: gene Location: 453-1778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-1425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-1425 bp Feature: domain Description: GIIM Note: maturase Location: 1494-1704 bp Feature: domain Description: GIIM Note: maturase Location: 1494-1704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: ATBP01000162.1 (12823 bp)
Overview 1 RT 1: 2973-10965 bp Neighborhood of RT #1 [2973, 10979] YfmG RVT-DGRs COG2865 CHAT NACHT TPR_12 TPR_12 Feature: gene Location: 2973-5168 bp Feature: domain Description: YfmG Location: 4407-5148 bp Feature: domain Description: YfmG Location: 4407-5148 bp Feature: gene Location: 5303-5476 bp Feature: gene Location: 5460-5873 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5463-5670 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5463-5670 bp Feature: gene Location: 6295-7734 bp Feature: domain Description: COG2865 Location: 6301-7726 bp Feature: domain Description: COG2865 Location: 6301-7726 bp Feature: gene Location: 8166-10979 bp Feature: domain Description: CHAT Location: 8577-9111 bp Feature: domain Description: CHAT Location: 8577-9111 bp Feature: domain Description: NACHT Location: 9387-9786 bp Feature: domain Description: NACHT Location: 9387-9786 bp Feature: domain Description: TPR_12 Location: 10599-10773 bp Feature: domain Description: TPR_12 Location: 10599-10773 bp Feature: domain Description: TPR_12 Location: 10815-10965 bp Feature: domain Description: TPR_12 Location: 10815-10965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, COG2865 (Predicted transcriptional regulator, contains HTH domain ), CHAT (pfam12770), NACHT (pfam05729), TPR_12 (pfam13424)

Seq: ATBP01001510.1 (2172 bp)
Overview 1 RT 1: 266-1973 bp Neighborhood of RT #1 [266, 2161] HRDC Avd_like RVT-DGRs Feature: gene Location: 266-835 bp Feature: domain Description: HRDC Location: 524-722 bp Feature: domain Description: HRDC Location: 524-722 bp Feature: gene Location: 813-1166 bp Feature: domain Description: Avd_like Location: 849-1155 bp Feature: domain Description: Avd_like Location: 849-1155 bp Feature: gene Location: 1166-2161 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1373-1973 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1373-1973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), Avd_like (cd16376), RVT-DGRs

Seq: ATBP01002794.1 (1005 bp)
Overview 1 RT 1: 3-889 bp Neighborhood of RT #1 [3, 889] RVT_N RVT-GII Feature: gene Location: 3-509 bp Feature: domain Description: RVT_N Location: 57-300 bp Feature: domain Description: RVT_N Location: 57-300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-462 bp Feature: gene Location: 740-889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: ATBP01000052.1 (19910 bp)
Overview 1 RT 1: 13477-19909 bp Neighborhood of RT #1 [13477, 19909] HTH_Hin_like HTH_Hin_like RVT_N RVT-GII xerS INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII GIIM Feature: gene Location: 13477-13914 bp Feature: domain Description: HTH_Hin_like Location: 13705-13759 bp Feature: domain Description: HTH_Hin_like Location: 13705-13759 bp Feature: domain Description: HTH_Hin_like Location: 13822-13906 bp Feature: domain Description: HTH_Hin_like Location: 13822-13906 bp Feature: gene Location: 14168-14587 bp Feature: gene Location: 14545-15231 bp Feature: domain Description: RVT_N Location: 14581-14728 bp Feature: domain Description: RVT_N Location: 14581-14728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14773-15151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14773-15151 bp Feature: gene Location: 15403-16530 bp Feature: domain Description: xerS Location: 15658-15778 bp Feature: domain Description: xerS Location: 15658-15778 bp Feature: domain Description: INT_RitA_C_like Location: 15973-16507 bp Feature: domain Description: INT_RitA_C_like Location: 15973-16 507 bp Feature: gene Location: 16530-17516 bp Feature: domain Description: INT_RitB_C_like Location: 16866-17451 bp Feature: domain Description: INT_RitB_C_like Location: 16 866-17451 bp Feature: gene Location: 17503-18516 bp Feature: domain Description: Phage_int_SAM_1 Location: 17554-17797 bp Feature: domain Description: Phage_int_SAM_1 Location: 17554-17797 bp Feature: domain Description: INT_RitC_C_like Location: 17881-18436 bp Feature: domain Description: INT_RitC_C_like Location: 17881-18436 bp Feature: gene Location: 18628-19392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18631-18868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18631-18868 bp Feature: domain Description: GIIM Note: maturase Location: 18931-19156 bp Feature: domain Description: GIIM Note: maturase Location: 18931-19156 bp Feature: gene Location: 19496-19909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Hin_like (cd00569), RVT_N (pfam13655), RVT-GII, xerS (PRK05084), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), GIIM (pfam08388)

Seq: ATBP01002178.1 (1404 bp)
Overview 1 RT 1: 842-1373 bp Neighborhood of RT #1 [842, 1384] RVT-GII Feature: gene Location: 842-1384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058-1373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058-1373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ATBP01001293.1 (2571 bp)
Overview 1 RT 1: 2-1886 bp Neighborhood of RT #1 [2, 2077] RVT-GII GIIM COG5421 COG5421 Feature: gene Location: 2-928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83-695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83-695 bp Feature: domain Description: GIIM Note: maturase Location: 740-926 bp Feature: domain Description: GIIM Note: maturase Location: 740-926 bp Feature: gene Location: 1161-1607 bp Feature: domain Description: COG5421 Location: 1290-1548 bp Feature: domain Description: COG5421 Location: 1290-1548 bp Feature: gene Location: 1637-2077 bp Feature: domain Description: COG5421 Location: 1643-1886 bp Feature: domain Description: COG5421 Location: 1643-18 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG5421 (Transposase )

Seq: ATBP01002709.1 (1046 bp)
Overview 1 RT 1: 77-1045 bp Neighborhood of RT #1 [77, 1045] RVT-GII Feature: gene Location: 77-625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173-560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173-560 bp Feature: gene Location: 878-1045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ATBP01002870.1 (944 bp)
Overview 1 RT 1: 1-932 bp Neighborhood of RT #1 [1, 943] RVT-DGRs RVT-DGRs Feature: gene Location: 1-681 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 103-385 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 103-385 bp Feature: gene Location: 740-943 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 743-932 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 743-932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: ATBP01001772.1 (1804 bp)
Overview 1 RT 1: 796-1608 bp Neighborhood of RT #1 [796, 1700] RVT-GII Feature: gene Location: 796-1002 bp Feature: gene Location: 1029-1208 bp Feature: gene Location: 1428-1700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1437-1608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1437-1608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ATBP01002877.1 (945 bp)
Overview 1 RT 1: 3-741 bp Neighborhood of RT #1 [3, 803] RVT_N RVT-GII Feature: gene Location: 3-803 bp Feature: domain Description: RVT_N Location: 75-318 bp Feature: domain Description: RVT_N Location: 75-318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: ATBP01000123.1 (14754 bp)
Overview 1 RT 1: 144-2697 bp Neighborhood of RT #1 [144, 2759] RVT-GII GIIM YhcG_C Feature: gene Location: 144-1310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-993 bp Feature: domain Description: GIIM Note: maturase Location: 1032-1236 bp Feature: domain Description: GIIM Note: maturase Location: 1032-123 6 bp Feature: gene Location: 1884-2057 bp Feature: gene Location: 2142-2759 bp Feature: domain Description: YhcG_C Location: 2235-2697 bp Feature: domain Description: YhcG_C Location: 223 5-2697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhcG_C

Seq: ATBP01003529.1 (591 bp)
Overview 1 RT 1: 3-579 bp Neighborhood of RT #1 [3, 590] RVT-DGRs Feature: gene Location: 3-590 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 273-579 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 273-579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: ATBP01002634.1 (1095 bp)
Overview 1 RT 1: 71-998 bp Neighborhood of RT #1 [71, 1093] RVT-GII Feature: gene Location: 71-1093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ATBP01000463.1 (6525 bp)
Overview 1 RT 1: 2465-5911 bp Neighborhood of RT #1 [2465, 6000] GT4_PimA-like LmbE RVT-G2Lb PRK05755 Feature: gene Location: 2465-3316 bp Feature: domain Description: GT4_PimA-like Location: 2534-3305 bp Feature: domain Description: GT4_PimA-like Location: 2534-3305 bp Feature: gene Location: 3530-3970 bp Feature: domain Description: LmbE Location: 3536-3875 bp Feature: domain Description: LmbE Location: 3536-3875 bp Feature: gene Location: 4278-5060 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 4521-5043 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 4521-5043 bp Feature: gene Location: 5104-6000 bp Feature: domain Description: PRK05755 Location: 5128-5911 bp Feature: domain Description: PRK05755 Location: 5128-5911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_PimA-like (cd03801), LmbE (COG2120), RVT-G2Lb, PRK05755 (DNA polymerase I; Provisional)

Seq: ATBP01001259.1 (2662 bp)
Overview 1 RT 1: 1603-2613 bp Neighborhood of RT #1 [1603, 2660] RVT-DGRs Feature: gene Location: 1603-1854 bp Feature: gene Location: 1892-2137 bp Feature: gene Location: 2337-2660 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2343-2613 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2343-2613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: ATBP01001215.1 (2750 bp)
Overview 1 RT 1: 931-2743 bp Neighborhood of RT #1 [931, 2748] RVT-DGRs Feature: gene Location: 931-1092 bp Feature: gene Location: 1340-1663 bp Feature: gene Location: 2470-2748 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2476-2743 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2476-2743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: ATBP01001241.1 (2697 bp)
Overview 1 RT 1: 2-2148 bp Neighborhood of RT #1 [2, 2441] HRDC RVT-DGRs TIR_2 Feature: gene Location: 2-502 bp Feature: domain Description: HRDC Location: 251-449 bp Feature: domain Description: HRDC Location: 251-449 bp Feature: gene Location: 627-1490 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 699-1284 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 699-1284 bp Feature: gene Location: 1474-1689 bp Feature: gene Location: 1812-2441 bp Feature: domain Description: TIR_2 Location: 1842-2148 bp Feature: domain Description: TIR_2 Location: 1842-2148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), RVT-DGRs, TIR_2 (pfam13676)

Seq: ATBP01000124.1 (14761 bp)
Overview 1 RT 1: 2-7251 bp Neighborhood of RT #1 [2, 7280] RVT_N RVT-GII xerC xerS INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII GIIM HNH tol_pal_ybgF Feature: gene Location: 2-802 bp Feature: domain Description: RVT_N Location: 77-320 bp Feature: domain Description: RVT_N Location: 77-320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-743 bp Feature: gene Location: 899-2128 bp Feature: domain Description: xerC Location: 914-1100 bp Feature: domain Description: xerC Location: 914-1100 bp Feature: domain Description: xerS Location: 1259-1373 bp Feature: domain Description: xerS Location: 1259-1373 bp Feature: domain Description: INT_RitA_C_like Location: 1568-2102 bp Feature: domain Description: INT_RitA_C_like Location: 1568-2102 bp Feature: gene Location: 2125-3111 bp Feature: domain Description: INT_RitB_C_like Location: 2461-3046 bp Feature: domain Description: INT_RitB_C_like Location: 2461-30 46 bp Feature: gene Location: 3098-4111 bp Feature: domain Description: Phage_int_SAM_1 Location: 3149-3392 bp Feature: domain Description: Phage_int_SAM_1 Location: 3149-3392 bp Feature: domain Description: INT_RitC_C_like Location: 3476-4028 bp Feature: domain Description: INT_RitC_C_like Location: 3476-4028 bp Feature: gene Location: 4247-5170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4265-4466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4265-4466 bp Feature: domain Description: GIIM Note: maturase Location: 4520-4751 bp Feature: domain Description: GIIM Note: maturase Location: 4520-4751 bp Feature: domain Description: HNH Note: nucleases Location: 4991-5129 bp Feature: domain Description: HNH Note: nucleases Location: 4991-5129 bp Feature: gene Location: 6255-6470 bp Feature: gene Location: 6636-7280 bp Feature: domain Description: tol_pal_ybgF Location: 7110-7251 bp Feature: domain Description: tol_pal_ybgF Location: 7110-7251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, xerC (PRK01287), xerS (PRK05084), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), GIIM (pfam08388), HNH (pfam01844)
tol_pal_ybgF (TIGR02795)

Seq: ATBP01001936.1 (1609 bp)
Overview 1 RT 1: 2-1464 bp Neighborhood of RT #1 [2, 1481] Cas2_I_II_III RVT-CRISPR RVT-CRISPR CSP_CDS Feature: gene Location: 2-244 bp Feature: domain Description: Cas2_I_II_III Location: 23-221 bp Feature: domain Description: Cas2_I_II_III Location: 23-221 bp Feature: gene Location: 259-669 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 265-577 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 265-577 bp Feature: gene Location: 684-1157 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 891-1152 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 891-1152 bp Feature: gene Location: 1170-1481 bp Feature: domain Description: CSP_CDS Location: 1320-1464 bp Feature: domain Description: CSP_CDS Location: 1320-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, CSP_CDS (cd04458)

Seq: ATBP01002269.1 (1337 bp)
Overview 1 RT 1: 2-1173 bp Neighborhood of RT #1 [2, 1190] DUF4160 RVT-DGRs Feature: gene Location: 2-289 bp Feature: domain Description: DUF4160 Location: 29-242 bp Feature: domain Description: DUF4160 Location: 29-242 bp Feature: gene Location: 740-934 bp Feature: gene Location: 948-1190 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 954-1173 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 954-1173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4160 (pfam13711), RVT-DGRs