myRT

myRT report for GCA_000517005.1_ASM51700v1

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Seq: KI912039.1 (378794 bp)
Overview 1 RT 1: 198-2903 bp Neighborhood of RT #1 [198, 2903] RVT-GII Feature: gene Location: 198-407 bp Feature: gene Location: 850-1098 bp Feature: gene Location: 1250-1831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1256-1436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 256-1 436 bp Feature: gene Location: 1916-2233 bp Feature: gene Location: 2676-2903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KI911935.1 (56434 bp)
Overview 1 RT 1: 17328-21492 bp Neighborhood of RT #1 [17328, 21497] GGDEF RVT-GII COG4875 Feature: gene Location: 17328-17537 bp Feature: gene Location: 17734-18540 bp Feature: domain Description: GGDEF Location: 18025-18472 bp Feature: domain Description: GGDEF Location: 1802 5-18472 bp Feature: gene Location: 18765-19940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18873-19563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18873-19563 bp Feature: gene Location: 20410-20616 bp Feature: gene Location: 21039-21497 bp Feature: domain Description: COG4875 Location: 21063-21492 bp Feature: domain Description: COG4875 Location: 2 1063-2 1492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GGDEF (TIGR00254), RVT-GII, COG4875 (Uncharacterized protein )

Seq: KI912087.1 (83830 bp)
Overview 1 RT 1: 22125-26222 bp Neighborhood of RT #1 [22125, 26222] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 22125-22253 bp Feature: gene Location: 22998-24164 bp Feature: gene Location: 23625-25556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23886-24684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 886-24684 bp Feature: domain Description: Intron_maturas2 Location: 24789-25029 bp Feature: domain Description: Intron_maturas2 Location: 24789-25029 bp Feature: domain Description: HNHc Note: nucleases Location: 25206-25374 bp Feature: domain Description: HNHc Note: nucleases Location: 25206-253 74 bp Feature: gene Location: 25740-26045 bp Feature: gene Location: 26067-26222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: KI912086.1 (96185 bp)
Overview 1 RT 1: 2-4431 bp Neighborhood of RT #1 [2, 4466] group_II_RT_mat RVT-GII DDE_Tnp_1_6 SAM_superfamily TOMM_kin_cyc Feature: gene Location: 2-208 bp Feature: gene Location: 320-511 bp Feature: gene Location: 366-818 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 372-513 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 372-513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615-816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615-816 bp Feature: gene Location: 838-1032 bp Feature: domain Description: DDE_Tnp_1_6 Location: 850-985 bp Feature: domain Description: DDE_Tnp_1_6 Location: 850-985 bp Feature: gene Location: 1299-4466 bp Feature: domain Description: SAM_superfamily Location: 1350-1512 bp Feature: domain Description: SAM_superfamily Location: 1350-1512 bp Feature: domain Description: TOMM_kin_cyc Location: 1551-4431 bp Feature: domain Description: TOMM_kin_cyc Location: 1551-4 4 31 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, DDE_Tnp_1_6 (pfam13751), SAM_superfamily (cl15755), TOMM_kin_cyc (TIGR03903)

Seq: KI912044.1 (116805 bp)
Overview 1 RT 1: 82473-87439 bp Neighborhood of RT #1 [82473, 87531] PLN02278 Transposase_20 KOG4768 RVT-GII Rve Feature: gene Location: 82473-84215 bp Feature: domain Description: PLN02278 Location: 82479-83673 bp Feature: domain Description: PLN02278 Location: 82479-83673 bp Feature: domain Description: Transposase_20 Location: 83847-84096 bp Feature: domain Description: Transposase_20 Location: 83847-84096 bp Feature: gene Location: 84733-85485 bp Feature: domain Description: KOG4768 Location: 84805-85441 bp Feature: domain Description: KOG4768 Location: 84805 -85 441 bp Feature: gene Location: 85533-86225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85536-85932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85 5 36-85 932 bp Feature: gene Location: 86613-86867 bp Feature: gene Location: 87337-87531 bp Feature: domain Description: Rve Location: 87340-87439 bp Feature: domain Description: Rve Location: 87340-87439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLN02278 (succinic semialdehyde dehydrogenase), Transposase_20 (pfam02371), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, Rve (COG3316)

Seq: KI912000.1 (19145 bp)
Overview 1 RT 1: 2-1645 bp Neighborhood of RT #1 [2, 1749] RVT-GII HTH_32 Feature: gene Location: 2-523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-509 bp Feature: gene Location: 656-967 bp Feature: gene Location: 1228-1749 bp Feature: domain Description: HTH_32 Location: 1405-1645 bp Feature: domain Description: HTH_32 Location: 1405-16 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_32 (pfam13565)

Seq: KI911947.1 (207010 bp)
Overview 1 RT 1: 163869-168292 bp Neighborhood of RT #1 [163869, 168292] nifH HTH_32 DDE_3 RVT-GII Feature: gene Location: 163869-164804 bp Feature: domain Description: nifH Location: 163914-164793 bp Feature: domain Description: nifH Location: 163914-1647 93 bp Feature: gene Location: 165637-166482 bp Feature: domain Description: HTH_32 Location: 165853-166063 bp Feature: domain Description: HTH_32 Location: 165853-166063 bp Feature: domain Description: DDE_3 Location: 166192-166474 bp Feature: domain Description: DDE_3 Location: 166192-16647 4 bp Feature: gene Location: 166717-167337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166741-166897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1667 41-166897 bp Feature: gene Location: 167719-167859 bp Feature: gene Location: 168125-168292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nifH (TIGR01287), HTH_32 (pfam13565), DDE_3 (pfam13358), RVT-GII