myRT

myRT report for GCA_000519285.1_ASM51928v1

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Seq: KI912609.1 (2920994 bp)
Overview 1 RT 1: 1178071-1182395 bp 2 RT 2: 1300362-1304267 bp 3 RT 3: 2170628-2174904 bp Neighborhood of RT #1 [1178071, 1182448] COG5421 RVT-GII GIIM SapB Neighborhood of RT #2 [1300362, 1304386] COG1578 RVT-GII GIIM RBR RBR RBR Neighborhood of RT #3 [2170628, 2175020] DUF5615 dCache_1 Tar RVT-GII AAAA RHH_1 Feature: gene Location: 1178071-1179771 bp Feature: domain Description: COG5421 Location: 1178227-1179544 bp Feature: domain Description: COG5421 Location: 1 1 78227-1 1 79544 bp Feature: gene Location: 1179778-1180140 bp Feature: gene Location: 1180349-1181653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1180649-1181297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 80649-1 1 81 297 bp Feature: domain Description: GIIM Note: maturase Location: 1181360-1181567 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 81 360-1 1 81 567 bp Feature: gene Location: 1181653-1181907 bp Feature: gene Location: 1181981-1182448 bp Feature: domain Description: SapB Location: 1181990-1182395 bp Feature: domain Description: SapB Location: 1 1 81 990-1 1 82395 bp Feature: gene Location: 1300362-1300844 bp Feature: domain Description: COG1578 Location: 1300365-1300815 bp Feature: domain Description: COG1 578 Location: 1 300365-1 30081 5 bp Feature: gene Location: 1301136-1301690 bp Feature: gene Location: 1302078-1303490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1302423-1303041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 302423-1 303041 bp Feature: domain Description: GIIM Note: maturase Location: 1303098-1303323 bp Feature: domain Description: GIIM Note: maturase Location: 1 303098-1 303323 bp Feature: gene Location: 1303738-1303986 bp Feature: gene Location: 1304021-1304386 bp Feature: domain Description: RBR Location: 1304084-1304120 bp Feature: domain Description: RBR Location: 1 304084-1 3041 20 bp Feature: domain Description: RBR Location: 1304156-1304204 bp Feature: domain Description: RBR Location: 1 3041 56-1 304204 bp Feature: domain Description: RBR Location: 1304219-1304267 bp Feature: domain Description: RBR Location: 1 30421 9-1 304267 bp Feature: gene Location: 2170628-2170996 bp Feature: domain Description: DUF5615 Location: 2170631-2170859 bp Feature: domain Description: DUF561 5 Location: 21 70631 -21 70859 bp Feature: gene Location: 2171504-2173573 bp Feature: domain Description: dCache_1 Location: 2171621-2172362 bp Feature: domain Description: dCache_1 Location: 21 71 621 -21 72362 bp Feature: domain Description: Tar Location: 2172377-2173571 bp Feature: domain Description: Tar Location: 21 72377-21 73571 bp Feature: gene Location: 2173770-2174072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2173959-2174049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 73959-21 74049 bp Feature: gene Location: 2174216-2174512 bp Feature: domain Description: AAAA Location: 2174267-2174459 bp Feature: domain Description: AAAA Location: 21 74267-21 74459 bp Feature: gene Location: 2174766-2175020 bp Feature: domain Description: RHH_1 Location: 2174802-2174904 bp Feature: domain Description: RHH_1 Location: 21 74802-21 74904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), RVT-GII, GIIM (pfam08388), SapB (smart00741), COG1578 (Uncharacterized conserved protein, contains ATP-grasp and redox domains ), RBR (pfam17208), DUF5615 (pfam18480), dCache_1 (pfam02743), Tar (COG0840), AAAA (COG1672)
RHH_1 (pfam01402)