myRT

myRT report for GCA_000519305.1_ASM51930v1

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Seq: JAFG01000034.1 (8409 bp)
Overview 1 RT 1: 1-2778 bp Neighborhood of RT #1 [1, 3227] lexA HTH_32 DDE_3 RVT-GII DDE_3 Feature: gene Location: 1-729 bp Feature: domain Description: lexA Location: 469-664 bp Feature: domain Description: lexA Location: 469-664 bp Feature: gene Location: 352-1476 bp Feature: domain Description: HTH_32 Location: 529-766 bp Feature: domain Description: HTH_32 Location: 529-766 bp Feature: domain Description: DDE_3 Location: 895-1345 bp Feature: domain Description: DDE_3 Location: 895-1 345 bp Feature: gene Location: 1609-2205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1618-1828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 8-1 828 bp Feature: gene Location: 2259-2513 bp Feature: gene Location: 2550-3227 bp Feature: domain Description: DDE_3 Location: 2562-2778 bp Feature: domain Description: DDE_3 Location: 2562-2778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lexA (TIGR00498), HTH_32 (pfam13565), DDE_3 (pfam13358), RVT-GII

Seq: KI912610.1 (1586967 bp)
Overview 1 RT 1: 1524300-1529184 bp Neighborhood of RT #1 [1524300, 1529210] Mpg RVT-Retrons ABC2_membrane_3 CcmA Feature: gene Location: 1524300-1524899 bp Feature: domain Description: Mpg Location: 1524318-1524885 bp Feature: domain Description: Mpg Location: 152 4318-152 4885 bp Feature: gene Location: 1525161-1526120 bp Feature: gene Location: 1526117-1527064 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1526222-1526804 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 152 62 2 2 -152 6804 bp Feature: gene Location: 1527157-1528233 bp Feature: domain Description: ABC2_membrane_3 Location: 1527178-1528207 bp Feature: domain Description: ABC2 _membrane_3 Location: 152 7178-152 82 07 bp Feature: gene Location: 1528290-1529210 bp Feature: domain Description: CcmA Location: 1528293-1529184 bp Feature: domain Description: CcmA Location: 152 82 93-152 9184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mpg (COG2094), RVT-Retrons, ABC2_membrane_3 (pfam12698), CcmA (COG4133)