myRT

myRT report for GCA_000520455.1_Pseu_aeru_BWHPSA037_V1

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Seq: KI914578.1 (345096 bp)
Overview 1 RT 1: 45993-54231 bp Neighborhood of RT #1 [45993, 54231] His_Phos_1 SF2_C_SNF RVT-GII GIIM HNHc DEXHc_HARP_SMARCAL1 RVT_N RVT-GII GIIM HNHc DEXHc_Snf Feature: gene Location: 45993-46610 bp Feature: domain Description: His_Phos_1 Location: 46005-46584 bp Feature: domain Description: His_Phos_1 Location: 46005-46584 bp Feature: gene Location: 46678-47727 bp Feature: domain Description: SF2_C_SNF Location: 47176-47563 bp Feature: domain Description: SF2_C_SNF Location: 471 76-47563 bp Feature: gene Location: 47840-49141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47843-48419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47843-4841 9 bp Feature: domain Description: GIIM Note: maturase Location: 48473-48704 bp Feature: domain Description: GIIM Note: maturase Location: 48473-48704 bp Feature: domain Description: HNHc Note: nucleases Location: 48938-49085 bp Feature: domain Description: HNHc Note: nucleases Location: 48938-49085 bp Feature: gene Location: 50140-50340 bp Feature: domain Description: DEXHc_HARP_SMARCAL1 Location: 50167-50290 bp Feature: domain Description: DEXHc_HARP_SMARCAL1 Location: 501 67-50290 bp Feature: gene Location: 50408-52126 bp Feature: domain Description: RVT_N Location: 50465-50702 bp Feature: domain Description: RVT_N Location: 50465-50702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50753-51404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50753-51 404 bp Feature: domain Description: GIIM Note: maturase Location: 51458-51689 bp Feature: domain Description: GIIM Note: maturase Location: 51 458-51 689 bp Feature: domain Description: HNHc Note: nucleases Location: 51923-52079 bp Feature: domain Description: HNHc Note: nucleases Location: 51 923-52079 bp Feature: gene Location: 52723-53778 bp Feature: domain Description: DEXHc_Snf Location: 52942-53209 bp Feature: domain Description: DEXHc_Snf Location: 52942-53209 bp Feature: gene Location: 53881-54231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: KI914576.1 (401385 bp)
Overview 1 RT 1: 331353-341659 bp 2 RT 2: 357917-366758 bp Neighborhood of RT #1 [331353, 341661] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [357917, 366787] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 331353-332474 bp Feature: domain Description: COG3177 Location: 331371-332463 bp Feature: domain Description: COG3177 Location: 331371-332 463 bp Feature: gene Location: 332733-332870 bp Feature: gene Location: 333198-334883 bp Feature: domain Description: RVT_N Location: 333255-333495 bp Feature: domain Description: RVT_N Location: 3332 55-333495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333543-334179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333543-334179 bp Feature: domain Description: GIIM Note: maturase Location: 334233-334464 bp Feature: domain Description: GIIM Note: maturase Location: 3342 33-334464 bp Feature: domain Description: HNH Note: nucleases Location: 334716-334854 bp Feature: domain Description: HNH Note: nucleases Location: 334716-334854 bp Feature: gene Location: 335964-339701 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 336072-336729 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 336072 -33672 9 bp Feature: domain Description: PRK09776 Location: 336942-337413 bp Feature: domain Description: PRK09776 Location: 336942 -337413 bp Feature: domain Description: PAS Location: 337485-337995 bp Feature: domain Description: PAS Location: 337485-337995 bp Feature: domain Description: PRK10060 Location: 338004-339651 bp Feature: domain Description: PRK10060 Location: 338004-339651 bp Feature: gene Location: 339808-341661 bp Feature: domain Description: PRK05658 Location: 339820-341659 bp Feature: domain Description: PRK05658 Location: 33982 0-341659 bp Feature: gene Location: 357917-359131 bp Feature: domain Description: PRK10770 Location: 357929-359123 bp Feature: domain Description: PRK10770 Location: 35792 9-35912 3 bp Feature: gene Location: 359190-361982 bp Feature: domain Description: LptD Location: 359385-361968 bp Feature: domain Description: LptD Location: 359385-361968 bp Feature: gene Location: 362115-363827 bp Feature: domain Description: RVT_N Location: 362172-362415 bp Feature: domain Description: RVT_N Location: 362 172 -362 415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362460-363096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362 460-363096 bp Feature: domain Description: YkfC Location: 363306-363456 bp Feature: domain Description: YkfC Location: 363306-363456 bp Feature: domain Description: HNH Note: nucleases Location: 363633-363771 bp Feature: domain Description: HNH Note: nucleases Location: 363633-363771 bp Feature: gene Location: 365100-366116 bp Feature: domain Description: COG3178 Location: 365103-366102 bp Feature: domain Description: COG3178 Location: 365103-366102 bp Feature: gene Location: 366113-366787 bp Feature: domain Description: NTP_transferase_like_1 Location: 366119-366758 bp Feature: domain Description: NTP_transferase_like_1 Location: 366119-366758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: KI914580.1 (286076 bp)
Overview 1 RT 1: 48114-51756 bp Neighborhood of RT #1 [48114, 51839] copper_res_A RVT-GII DUF772 ABC_phnC Feature: gene Location: 48114-48425 bp Feature: gene Location: 48438-48653 bp Feature: domain Description: copper_res_A Location: 48441-48645 bp Feature: domain Description: copper_res_A Location: 48441-48645 bp Feature: gene Location: 48650-49639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48863-49520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48863 -49520 bp Feature: gene Location: 50028-50669 bp Feature: domain Description: DUF772 Location: 50178-50373 bp Feature: domain Description: DUF772 Location: 50178-503 73 bp Feature: gene Location: 51012-51839 bp Feature: domain Description: ABC_phnC Location: 51042-51756 bp Feature: domain Description: ABC_phnC Location: 51042-51756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT